RNA–Protein interactions for RNA: ENST00000354504.7

VPS54-202, Transcript of VPS54, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS54, Length 3,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-202ENST00000354504 HNF4AP41235 474 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 YAP1P46937 504 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 OMPP47874 163 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 KCNJ5P48544 419 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 PDX1P52945 283 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 PLA2G16P53816 162 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 CTXN1P60606 82 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 CXCR4P61073 352 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 PRDX1Q06830 199 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 PIGFQ07326 219 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 PPP1R8Q12972 351 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 RUNX2Q13950 521 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 FAM53BQ14153 422 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 MAD2L1BPQ15013 274 aaPredicted RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 PDGFRLQ15198 375 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 ALG11Q2TAA5 492 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 PRICKLE4Q2TBC4 344 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 PRTGQ2VWP7 1150 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 KHDRBS2Q5VWX1 349 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 ASPHD2Q6ICH7 369 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 CD200R1LQ6Q8B3 271 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 FRRS1Q6ZNA5 592 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 USP30Q70CQ3 517 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 IKBIPQ70UQ0 350 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 LYPD6Q86Y78 171 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 ANKRD13BQ86YJ7 626 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 MMAAQ8IVH4 418 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 TBC1D21Q8IYX1 336 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 OFCC1Q8IZS5 231 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 PARP8Q8N3A8 854 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 KLHL36Q8N4N3 616 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 OR52N2Q8NGI0 321 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 OR52E1Q8NGJ3 308 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 UTP15Q8TED0 518 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 SLC5A11Q8WWX8 675 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 EXT2Q93063 718 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 CLDN23Q96B33 292 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 AP2M1Q96CW1 435 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 SNX22Q96L94 193 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 CAMK1GQ96NX5 476 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 PLA2G12AQ9BZM1 189 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 TINAGL1Q9GZM7 467 aaPredicted RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 REEP4Q9H6H4 257 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 ANKRA2Q9H9E1 313 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 IL1RL2Q9HB29 575 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 ZFP14Q9HCL3 533 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 FAM60AQ9NP50 221 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 PARD6AQ9NPB6 346 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 MRGBPQ9NV56 204 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 GIN1Q9NXP7 522 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 KLQ9UEF7 1012 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 RCE1Q9Y256 329 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 PIEZO2Q9H5I5 2752 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 NCOA6Q14686 2063 aaPredicted RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 LOC105369274A0A096LPK9 316 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 LOC102723532A0A0G2JNH3 316 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 TRBV4-1A0A0J9YWV2 114 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 ELOVL7A1L3X0 281 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 CCDC182A6NF36 153 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 CLIC1O00299 241 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 MBTPS2O43462 519 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 KIF1CO43896 1103 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 SNX2O60749 519 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 ATG13O75143 517 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 NME6O75414 186 aaPredicted RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 POP7O75817 140 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 CCNDBP1O95273 360 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 IL3P08700 152 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 ANXA5P08758 320 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 HBQ1P09105 142 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 OR56A5P0C7T3 313 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 ELFN1P0C7U0 828 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 TFPIP10646 304 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 HOXA5P20719 270 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 ZFP36P26651 326 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 IDUAP35475 653 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 LIPAP38571 399 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 RPS9P46781 194 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 TPMTP51580 245 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 RPS6KA3P51812 740 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 SLURP1P55000 103 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 ZNF763Q0D2J5 394 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 TRIP10Q15642 601 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 MAPK14Q16539 360 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 RBBP7Q16576 425 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 SPIN4Q56A73 249 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 XKR6Q5GH73 641 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 FGD3Q5JSP0 725 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 TMEM31Q5JXX7 168 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 ENTPD8Q5MY95 495 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 EOGTQ5NDL2 527 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 C6orf141Q5SZD1 244 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 RARS2Q5T160 578 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 C18orf63Q68DL7 685 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 TYW3Q6IPR3 259 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 DOK6Q6PKX4 331 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 NPSR1Q6W5P4 371 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 TMEM64Q6YI46 380 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 RBM44Q6ZP01 1051 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 Q6ZS52 159 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms