RNA–Protein interactions for RNA: ENST00000349780.8

CDK5RAP2-201, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 6,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-201ENST00000349780 HTR6P50406 440 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 ZNF852Q6ZMS4 543 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 FRMD1Q8N878 549 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 RASGEF1AQ8N9B8 481 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 ALOXE3Q9BYJ1 711 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 ACSS1Q9NUB1 689 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 ZNF226Q9NYT6 803 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 PCTPQ9UKL6 214 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 ENPP4Q9Y6X5 453 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 RENP00797 406 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 RHOP08100 348 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 GABRB1P18505 474 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 NME2P22392 152 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 PREPP48147 710 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 SNRPD1P62314 119 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 MAPK14Q16539 360 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 NKPD1Q17RQ9 610 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.19□□□□□ -0.623e-7■■■□□ 19.2
CDK5RAP2-201ENST00000349780 KLHDC8BQ8IXV7 354 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 THEM6Q8WUY1 208 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 NPAS1Q99742 590 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 NRCAMQ92823 1304 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 MRC1P22897 1456 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 LINC00862A6NCI5 91 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 FBXO24O75426 580 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 GBAP04062 536 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 LIPCP11150 499 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 FDXRP22570 491 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 GRK6P43250 576 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 GIPRP48546 466 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 EEF1A1P68104 462 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 HOXC5Q00444 222 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 EEF1A2Q05639 463 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 UBE2NLQ5JXB2 153 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 EEF1A1P5Q5VTE0 462 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 CCDC190Q86UF4 302 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 ZNF679Q8IYX0 411 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 CLECL1Q8IZS7 167 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 PLPP5Q8NEB5 264 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 ZNF563Q8TA94 476 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 ARL5CA6NH57 179 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 YJEFN3A6XGL0 299 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 AGAP14A8MT82 685 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 SLURP2P0DP57 97 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 PRSS3P35030 304 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 ERVPABLB-1P60509 514 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 CXCL9Q07325 125 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 FAM111BQ6SJ93 734 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 SCGB1C1Q8TD33 95 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 OSBPL2Q9H1P3 480 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 C19orf12Q9NSK7 152 aa11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 PURGQ9UJV8 347 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP2-201ENST00000349780 HNF1AP20823 631 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 MAPK9P45984 424 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 ZXDBP98169 803 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 ACTBL2Q562R1 376 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 SDHAF4Q5VUM1 108 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 DPPA4Q7L190 304 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 ZNF566Q969W8 418 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 BTN2A3PQ96KV6 586 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 CYP2S1Q96SQ9 504 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 ICKQ9UPZ9 632 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 RIPK3Q9Y572 518 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 ETFAP13804 333 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 ZNF20P17024 532 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 LMO2P25791 158 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 SCNN1AP37088 669 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 NAA10P41227 235 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 ZNF91Q05481 1191 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 RBMS2Q15434 407 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 GPR157Q5UAW9 335 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 LIPIQ6XZB0 460 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 ZNF600Q6ZNG1 722 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 CEP68Q76N32 757 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 OR4M1Q8NGD0 313 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 CDCA5Q96FF9 252 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 PRO1933Q9H354 126 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 ZNF385DQ9H6B1 395 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 MKKSQ9NPJ1 570 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 UPK3BL1B0FP48 263 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 UPK3BL2E5RIL1 263 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 PHOX2AO14813 284 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 HMGB3O15347 200 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 ERCC1P07992 297 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 SMPD1P17405 629 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 UQCRC2P22695 453 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 CALCRP30988 508 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 PCBP2Q15366 365 aaKnown RBP eCLIP11.18□□□□□ -0.622e-7■■■■□ 25.1
CDK5RAP2-201ENST00000349780 HLA-DQA1Q5Y7H0 255 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 HBMQ6B0K9 141 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 SMIM3Q9BZL3 60 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 FBXW2Q9UKT8 454 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 LSM5Q9Y4Y9 91 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 KPTNQ9Y664 436 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 ONECUT3O60422 494 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 TBL1XO60907 577 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 SOX9P48436 509 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 ARL4DP49703 201 aa11.18□□□□□ -0.62
CDK5RAP2-201ENST00000349780 TAS2R50P59544 299 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms