RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 COLEC12Q5KU26 742 aa17.33■□□□□ 0.37
PTN-201ENST00000348225 TCTN3Q6NUS6 607 aa17.33■□□□□ 0.37
PTN-201ENST00000348225 TAGAPQ8N103 731 aa17.33■□□□□ 0.37
PTN-201ENST00000348225 OR4C15Q8NGM1 316 aa17.33■□□□□ 0.37
PTN-201ENST00000348225 SLC2A12Q8TD20 617 aa17.33■□□□□ 0.37
PTN-201ENST00000348225 PHF10Q8WUB8 498 aaKnown RBP17.33■□□□□ 0.37
PTN-201ENST00000348225 NR4A3Q92570 626 aa17.33■□□□□ 0.37
PTN-201ENST00000348225 RNF31Q96EP0 1072 aa17.33■□□□□ 0.37
PTN-201ENST00000348225 ARHGDIGQ99819 225 aa17.33■□□□□ 0.37
PTN-201ENST00000348225 ITPAQ9BY32 194 aa17.33■□□□□ 0.37
PTN-201ENST00000348225 SEC16AO15027 2179 aa17.33■□□□□ 0.36
PTN-201ENST00000348225 GPR179Q6PRD1 2367 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 MEN1O00255 615 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 LRP3O75074 770 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 RFPL3O75679 317 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 CLPSP04118 112 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 CDH2P19022 906 aaPredicted RBP17.32■□□□□ 0.36
PTN-201ENST00000348225 RPS4Y1P22090 263 aaKnown RBP17.32■□□□□ 0.36
PTN-201ENST00000348225 HMGA2P52926 109 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 SLC37A1P57057 533 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 GANABQ14697 944 aaKnown RBP17.32■□□□□ 0.36
PTN-201ENST00000348225 LAPTM4AQ15012 233 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 CSRP2Q16527 193 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 LAPTM4BQ86VI4 370 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 ATG16L2Q8NAA4 619 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 OR4D11Q8NGI4 311 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 GIPC3Q8TF64 312 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 ZG16BQ96DA0 208 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 BARD1Q99728 777 aaKnown RBP17.32■□□□□ 0.36
PTN-201ENST00000348225 G6PC3Q9BUM1 346 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 OR8D2Q9GZM6 311 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 ARMC7Q9H6L4 198 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 ACER3Q9NUN7 267 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 NCDNQ9UBB6 729 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 COPS7AQ9UBW8 275 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 DTX4Q9Y2E6 619 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 OR10H1Q9Y4A9 318 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 COL27A1Q8IZC6 1860 aaPredicted RBP17.32■□□□□ 0.36
PTN-201ENST00000348225 MAGEA13PA6NCF6 341 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 UGT2B17O75795 530 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 EPPINO95925 133 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 CYC1P08574 325 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 CCL4P13236 92 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 EFNA3P52797 238 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 MICAQ29983 383 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 EXOC3L2Q2M3D2 409 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 ZIK1Q3SY52 487 aaPredicted RBP17.32■□□□□ 0.36
PTN-201ENST00000348225 FLYWCH1Q4VC44 716 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 CCDC157Q569K6 752 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 AP1ARQ63HQ0 302 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 KRT80Q6KB66 452 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 NPSR1Q6W5P4 371 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 COMTD1Q86VU5 262 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 RBM45Q8IUH3 476 aaKnown RBP17.32■□□□□ 0.36
PTN-201ENST00000348225 LACC1Q8IV20 430 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 ZNF555Q8NEP9 628 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 OR6T1Q8NGN1 323 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 OR52J3Q8NH60 311 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 GATA6Q92908 595 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 LRFN5Q96NI6 719 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 SLC26A1Q9H2B4 701 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 TOR3AQ9H497 397 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 SLC39A1Q9NY26 324 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 ACAD8Q9UKU7 415 aa17.32■□□□□ 0.36
PTN-201ENST00000348225 VSTM2BA6NLU5 285 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 DDAH2O95865 285 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 IGKV3-11P04433 115 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 KLK3P07288 261 aaPredicted RBP17.31■□□□□ 0.36
PTN-201ENST00000348225 H1F0P07305 194 aaKnown RBP17.31■□□□□ 0.36
PTN-201ENST00000348225 UBTFL6P0CB48 400 aaPredicted RBP17.31■□□□□ 0.36
PTN-201ENST00000348225 CT45A8P0DMV1 189 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 CT45A9P0DMV2 189 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 IFNA8P32881 189 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 PIGAP37287 484 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 LIMS1P48059 325 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 CHN2P52757 468 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 RAB15P59190 212 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 CT45A2Q5DJT8 189 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 RNF220Q5VTB9 566 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 TTC23Q5W5X9 447 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 KDM4DQ6B0I6 523 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 FAHD1Q6P587 224 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 ZNF836Q6ZNA1 936 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 SHISA6Q6ZSJ9 500 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 MORN4Q8NDC4 146 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 PIK3C3Q8NEB9 887 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 OR10G2Q8NGC3 310 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 ZNF721Q8TF20 911 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 METTL21AQ8WXB1 218 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 DHRS1Q96LJ7 313 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 PRRC1Q96M27 445 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 SOX17Q9H6I2 414 aaPredicted RBP17.31■□□□□ 0.36
PTN-201ENST00000348225 EVA1AQ9H8M9 152 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 GPN3Q9UHW5 284 aaPredicted RBP17.31■□□□□ 0.36
PTN-201ENST00000348225 TMEFF2Q9UIK5 374 aaPredicted RBP17.31■□□□□ 0.36
PTN-201ENST00000348225 TMCC3Q9ULS5 477 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 CBLCQ9ULV8 474 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 GPR55Q9Y2T6 319 aaPredicted RBP17.31■□□□□ 0.36
PTN-201ENST00000348225 NINQ8N4C6 2090 aa17.31■□□□□ 0.36
PTN-201ENST00000348225 C4orf47A7E2U8 309 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms