RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 TBCCD1Q9NVR7 557 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 KCNIP1Q9NZI2 227 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 MEMO1Q9Y316 297 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 A0A1B0GTL3 188 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 METTL21EPA6NDL7 271 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 CTBSQ01459 385 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 MVKQ03426 396 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 RPL13AP3Q6NVV1 102 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 OR5L1Q8NGL2 311 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 IFI44Q8TCB0 444 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 TANKQ92844 425 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 DTD2Q96FN9 168 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 RDH12Q96NR8 316 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 RNF38Q9H0F5 515 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 DKK3Q9UBP4 350 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 NDRG3Q9UGV2 375 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 SHROOM3Q8TF72 1996 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 NUAK1O60285 661 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 ADAM8P78325 824 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 ASTLQ6HA08 431 aaPredicted RBP10.29□□□□□ -0.76
CLCN6-202ENST00000346436 MAMDC2Q7Z304 686 aaPredicted RBP10.29□□□□□ -0.76
CLCN6-202ENST00000346436 GPR26Q8NDV2 337 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 TIMD4Q96H15 378 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 OR6C1Q96RD1 312 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 ACPTQ9BZG2 426 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 TAS2R7Q9NYW3 318 aa10.29□□□□□ -0.76
CLCN6-202ENST00000346436 SPEM2Q0P670 501 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 EXT1Q16394 746 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 IDNKQ5T6J7 187 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 TRAPPC6BQ86SZ2 158 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 PDZD3Q86UT5 571 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 OR1J2Q8NGS2 313 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 C11orf24Q96F05 449 aaPredicted RBP10.28□□□□□ -0.76
CLCN6-202ENST00000346436 C5AR2Q9P296 337 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 DRGXA6NNA5 263 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 WASH4PA8MWX3 477 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 C17orf105B2RV13 164 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 PGAM2P15259 253 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 SDC2P34741 201 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 TAP2Q03519 686 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 ARHGAP19Q14CB8 494 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 PLGLAQ15195 96 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 YOD1Q5VVQ6 348 aaPredicted RBP10.28□□□□□ -0.76
CLCN6-202ENST00000346436 ANKRD34AQ69YU3 496 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 Q6ZSR9 355 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 OR9Q2Q8NGE9 314 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 OR2L8Q8NGY9 312 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 SLC39A13Q96H72 371 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 ASB1Q9Y576 335 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 MYO9BQ13459 2157 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 TRBV11-1A0A0K0K1C0 115 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 EIF1AYO14602 144 aaKnown RBP10.28□□□□□ -0.76
CLCN6-202ENST00000346436 IFI30P13284 250 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 HTR3AP46098 478 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 NFE2L1Q14494 772 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 TYSND1Q2T9J0 566 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 PARM1Q6UWI2 310 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 NAGSQ8N159 534 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 FAM160A2Q8N612 972 aaPredicted RBP10.28□□□□□ -0.76
CLCN6-202ENST00000346436 GOLM1Q8NBJ4 401 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 CHDHQ8NE62 594 aaPredicted RBP10.28□□□□□ -0.76
CLCN6-202ENST00000346436 OR14A16Q8NHC5 309 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 C15orf40Q8WUR7 153 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 PGAM5Q96HS1 289 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 ALOXE3Q9BYJ1 711 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 TRIP11Q15643 1979 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 XIRP1Q702N8 1843 aaKnown RBP10.28□□□□□ -0.76
CLCN6-202ENST00000346436 DPM1O60762 260 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 WNT11O96014 354 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 IL3P08700 152 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 H2BFMP0C1H6 154 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 HK1P19367 917 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 CD9P21926 228 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 NR0B1P51843 470 aaKnown RBP10.28□□□□□ -0.76
CLCN6-202ENST00000346436 PHC1P78364 1004 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 SIGLEC14Q08ET2 396 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 TRAM2Q15035 370 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 C14orf28Q4W4Y0 310 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 CDH24Q86UP0 819 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 TIGD4Q8IY51 512 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 CCDC116Q8IYX3 515 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 NAXEQ8NCW5 288 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 HUS1BQ8NHY5 278 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 THEM6Q8WUY1 208 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 ITFG2Q969R8 447 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 ENKD1Q9H0I2 346 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 TRPV5Q9NQA5 729 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 ITGB1BP2Q9UKP3 347 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 RPL36Q9Y3U8 105 aaKnown RBP10.28□□□□□ -0.76
CLCN6-202ENST00000346436 FAM155AB1AL88 458 aaPredicted RBP10.28□□□□□ -0.76
CLCN6-202ENST00000346436 ADORA3P0DMS8 318 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 SDC1P18827 310 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 CRHBPP24387 322 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 TACR1P25103 407 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 MAPK3P27361 379 aaPredicted RBP10.28□□□□□ -0.76
CLCN6-202ENST00000346436 XCR1P46094 333 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 ARF5P84085 180 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 EMX1Q04741 257 aaPredicted RBP10.28□□□□□ -0.76
CLCN6-202ENST00000346436 LIPKQ5VXJ0 399 aa10.28□□□□□ -0.76
CLCN6-202ENST00000346436 PARS2Q7L3T8 475 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms