RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 NDOR1Q9UHB4 597 aa13.15□□□□□ -0.3
CDK5RAP1-202ENST00000346416 PLCL2Q9UPR0 1127 aa13.15□□□□□ -0.3
CDK5RAP1-202ENST00000346416 SPEGQ15772 3267 aa13.15□□□□□ -0.3
CDK5RAP1-202ENST00000346416 AP3D1O14617 1153 aa13.15□□□□□ -0.3
CDK5RAP1-202ENST00000346416 BCAT2O15382 392 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP1-202ENST00000346416 NSA2O95478 260 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP1-202ENST00000346416 CBX7O95931 251 aa13.15□□□□□ -0.3
CDK5RAP1-202ENST00000346416 LCKP06239 509 aa13.15□□□□□ -0.3
CDK5RAP1-202ENST00000346416 CDK4P11802 303 aa13.15□□□□□ -0.3
CDK5RAP1-202ENST00000346416 ST13P50502 369 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP1-202ENST00000346416 AFF3P51826 1226 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP1-202ENST00000346416 C21orf59P57076 290 aa13.15□□□□□ -0.3
CDK5RAP1-202ENST00000346416 ST3GAL3Q11203 375 aa13.15□□□□□ -0.3
CDK5RAP1-202ENST00000346416 TRAM2Q15035 370 aa13.15□□□□□ -0.3
CDK5RAP1-202ENST00000346416 MAPK14Q16539 360 aa13.15□□□□□ -0.3
CDK5RAP1-202ENST00000346416 ZNF619Q8N2I2 560 aa13.15□□□□□ -0.3
CDK5RAP1-202ENST00000346416 B3GNT7Q8NFL0 401 aa13.15□□□□□ -0.3
CDK5RAP1-202ENST00000346416 OR52R1Q8NGF1 315 aa13.15□□□□□ -0.3
CDK5RAP1-202ENST00000346416 MCHR1Q99705 422 aa13.15□□□□□ -0.3
CDK5RAP1-202ENST00000346416 PDE7BQ9NP56 450 aa13.15□□□□□ -0.3
CDK5RAP1-202ENST00000346416 CLN6Q9NWW5 311 aa13.15□□□□□ -0.3
CDK5RAP1-202ENST00000346416 LRIT1Q9P2V4 623 aa13.15□□□□□ -0.3
CDK5RAP1-202ENST00000346416 NTNG1Q9Y2I2 539 aa13.15□□□□□ -0.3
CDK5RAP1-202ENST00000346416 RNF215Q9Y6U7 377 aa13.15□□□□□ -0.3
CDK5RAP1-202ENST00000346416 ASXL3Q9C0F0 2248 aa13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 SH3D21A4FU49 640 aa13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 TGFBR3LH3BV60 316 aa13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 BCAS1O75363 584 aaPredicted RBP13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 THBS1P07996 1170 aa13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 STSP08842 583 aa13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 IFNA8P32881 189 aa13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 GABRA3P34903 492 aa13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 EEF1A1P68104 462 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 ALDH6A1Q02252 535 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 DMWDQ09019 674 aa13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 ST3GAL4Q11206 333 aa13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 STX4Q12846 297 aa13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 MAP4K2Q12851 820 aa13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 ERV3-1Q14264 604 aa13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 CTF1Q16619 201 aa13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 SYT16Q17RD7 645 aa13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 C12orf73Q69YU5 71 aa13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 FIGNL1Q6PIW4 674 aa13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 PLEKHM3Q6ZWE6 761 aa13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 GALNT12Q8IXK2 581 aa13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 STX19Q8N4C7 294 aa13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 YIPF6Q96EC8 236 aa13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 ZDHHC12Q96GR4 267 aa13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 SAP130Q9H0E3 1048 aa13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 CAPN10Q9HC96 672 aa13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 MRPS33Q9Y291 106 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 SIT1Q9Y3P8 196 aa13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 CACNA1IQ9P0X4 2223 aa13.14□□□□□ -0.31
CDK5RAP1-202ENST00000346416 CTNSO60931 367 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 NTN1O95631 604 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 S1PR1P21453 382 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 FNTBP49356 437 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 ZNF155Q12901 538 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 AQP6Q13520 282 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 TBCEQ15813 527 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 GARNL3Q5VVW2 1013 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 UBE2UQ5VVX9 321 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 NIPAL1Q6NVV3 410 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 CASP12Q6UXS9 341 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 ZNF730Q6ZMV8 503 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 MEX3DQ86XN8 651 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 METTL27Q8N6F8 245 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 MMABQ96EY8 250 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 RBM18Q96H35 190 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 GUCD1Q96NT3 240 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 RAB33BQ9H082 229 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 ANKRD19PQ9H560 264 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 EPHA6Q9UF33 1036 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 KCNE5Q9UJ90 142 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 TP53BP1Q12888 1972 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 NPIPA5A0A0B4J1W7 369 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 GXYLT2A0PJZ3 443 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 OR2W5A6NFC9 320 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 NPIPA7E9PJI5 369 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 PEX12O00623 359 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 HRO43593 1189 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 KIAA0513O60268 411 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 GABARAPO95166 117 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 THY1P04216 161 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 DBIP07108 87 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 NPIPA8P0DM63 369 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 GSTM3P21266 225 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 RPS4Y1P22090 263 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 STT3AP46977 705 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 EPHA4P54764 986 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 SNRPGP62308 76 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 POU6F2P78424 691 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 BTG2P78543 158 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 DCTN2Q13561 401 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 SPCS2Q15005 226 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 EIPR1Q53HC9 387 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 TCTE1Q5JU00 501 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 RRM2BQ7LG56 351 aa13.13□□□□□ -0.31
CDK5RAP1-202ENST00000346416 PRICKLE2Q7Z3G6 844 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms