RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 ZNF548Q8NEK5 533 aaPredicted RBP13.78□□□□□ -0.2
PBX3-201ENST00000342287 OR2L5Q8NG80 312 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 SLC9A6Q92581 669 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 RNF31Q96EP0 1072 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 NSMCE2Q96MF7 247 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 FRMD6Q96NE9 622 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 KCNC2Q96PR1 638 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 TBCDQ9BTW9 1192 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 AICDAQ9GZX7 198 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 SDHAF3Q9NRP4 125 aa13.78□□□□□ -0.2
PBX3-201ENST00000342287 GPR37L1O60883 481 aa13.77□□□□□ -0.2
PBX3-201ENST00000342287 UMPSP11172 480 aa13.77□□□□□ -0.2
PBX3-201ENST00000342287 HOXA6P31267 233 aa13.77□□□□□ -0.2
PBX3-201ENST00000342287 GPC1P35052 558 aa13.77□□□□□ -0.2
PBX3-201ENST00000342287 STXBP1P61764 594 aaKnown RBP13.77□□□□□ -0.2
PBX3-201ENST00000342287 HNRNPKP61978 463 aaKnown RBP eCLIP13.77□□□□□ -0.2
PBX3-201ENST00000342287 DMWDQ09019 674 aa13.77□□□□□ -0.2
PBX3-201ENST00000342287 ABHD18Q0P651 414 aa13.77□□□□□ -0.2
PBX3-201ENST00000342287 C21orf62-AS1Q17RA5 79 aa13.77□□□□□ -0.2
PBX3-201ENST00000342287 IQCCQ4KMZ1 466 aa13.77□□□□□ -0.2
PBX3-201ENST00000342287 SOWAHCQ53LP3 525 aaPredicted RBP13.77□□□□□ -0.2
PBX3-201ENST00000342287 FBXO42Q6P3S6 717 aa13.77□□□□□ -0.2
PBX3-201ENST00000342287 FIGLAQ6QHK4 219 aa13.77□□□□□ -0.2
PBX3-201ENST00000342287 SPESP1Q6UW49 350 aa13.77□□□□□ -0.2
PBX3-201ENST00000342287 TEX261Q6UWH6 196 aa13.77□□□□□ -0.2
PBX3-201ENST00000342287 TIGD4Q8IY51 512 aa13.77□□□□□ -0.2
PBX3-201ENST00000342287 HS3ST5Q8IZT8 346 aa13.77□□□□□ -0.2
PBX3-201ENST00000342287 OR4A15Q8NGL6 344 aa13.77□□□□□ -0.2
PBX3-201ENST00000342287 GOT1L1Q8NHS2 421 aaPredicted RBP13.77□□□□□ -0.2
PBX3-201ENST00000342287 TEFMQ96QE5 360 aaKnown RBP13.77□□□□□ -0.2
PBX3-201ENST00000342287 DCLRE1CQ96SD1 692 aaKnown RBP13.77□□□□□ -0.2
PBX3-201ENST00000342287 KCNS3Q9BQ31 491 aa13.77□□□□□ -0.2
PBX3-201ENST00000342287 MACROD1Q9BQ69 325 aa13.77□□□□□ -0.2
PBX3-201ENST00000342287 GORASP2Q9H8Y8 452 aa13.77□□□□□ -0.2
PBX3-201ENST00000342287 KLK4Q9Y5K2 254 aa13.77□□□□□ -0.2
PBX3-201ENST00000342287 U3KQ87 197 aa13.77□□□□□ -0.2
PBX3-201ENST00000342287 HEATR5BQ9P2D3 2071 aa13.77□□□□□ -0.2
PBX3-201ENST00000342287 A0A0A6YYD5 115 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 TCRBV5S2A0A599 114 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 FAM220BPB1ANY3 271 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 ERI3O43414 337 aaKnown RBP13.77□□□□□ -0.21
PBX3-201ENST00000342287 TMPRSS11DO60235 418 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 APOC1P02654 83 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 STATHP02808 62 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 CSNK1EP49674 416 aaKnown RBP13.77□□□□□ -0.21
PBX3-201ENST00000342287 GZMMP51124 257 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 PER3P56645 1201 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 ISL1P61371 349 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 PPP1R8Q12972 351 aaKnown RBP13.77□□□□□ -0.21
PBX3-201ENST00000342287 BAMBIQ13145 260 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 TOR1AIP1Q5JTV8 583 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 ABHD17CQ6PCB6 329 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 Q96MT0 163 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 SLC6A16Q9GZN6 736 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 RDH8Q9NYR8 311 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 ZNF282Q9UDV7 671 aaPredicted RBP13.77□□□□□ -0.21
PBX3-201ENST00000342287 PCDHGB1Q9Y5G3 927 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 CCDC163A0A0D9SF12 145 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 TBX19O60806 448 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 GPX2P18283 190 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 PPIBP23284 216 aaKnown RBP13.77□□□□□ -0.21
PBX3-201ENST00000342287 TSFMP43897 325 aaKnown RBP13.77□□□□□ -0.21
PBX3-201ENST00000342287 HOXA1P49639 335 aaPredicted RBP13.77□□□□□ -0.21
PBX3-201ENST00000342287 GDI2P50395 445 aaKnown RBP13.77□□□□□ -0.21
PBX3-201ENST00000342287 SLC9A5Q14940 896 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 TRIM40Q6P9F5 258 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 SERPINA11Q86U17 422 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 OOSP2Q86WS3 158 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 RBPMSQ93062 196 aaKnown RBP13.77□□□□□ -0.21
PBX3-201ENST00000342287 SLC47A1Q96FL8 570 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 MBOAT4Q96T53 435 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 CCDC32Q9BV29 185 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 TPT1P8Q9HAU6 139 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 PRDM7Q9NQW5 492 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 USE1Q9NZ43 259 aa13.77□□□□□ -0.21
PBX3-201ENST00000342287 PLXND1Q9Y4D7 1925 aa13.76□□□□□ -0.21
PBX3-201ENST00000342287 ARHGEF17Q96PE2 2063 aaPredicted RBP13.76□□□□□ -0.21
PBX3-201ENST00000342287 A0A0G2JN53 185 aa13.76□□□□□ -0.21
PBX3-201ENST00000342287 PPM1DO15297 605 aa13.76□□□□□ -0.21
PBX3-201ENST00000342287 BCAT2O15382 392 aaPredicted RBP13.76□□□□□ -0.21
PBX3-201ENST00000342287 ANXA6P08133 673 aa13.76□□□□□ -0.21
PBX3-201ENST00000342287 TGFBR2P37173 567 aa13.76□□□□□ -0.21
PBX3-201ENST00000342287 AFF3P51826 1226 aaKnown RBP13.76□□□□□ -0.21
PBX3-201ENST00000342287 HBA1P69905 142 aa13.76□□□□□ -0.21
PBX3-201ENST00000342287 TGM3Q08188 693 aa13.76□□□□□ -0.21
PBX3-201ENST00000342287 MPEG1Q2M385 716 aa13.76□□□□□ -0.21
PBX3-201ENST00000342287 ZMAT1Q5H9K5 638 aa13.76□□□□□ -0.21
PBX3-201ENST00000342287 FCRL6Q6DN72 434 aa13.76□□□□□ -0.21
PBX3-201ENST00000342287 ARMC6Q6NXE6 501 aa13.76□□□□□ -0.21
PBX3-201ENST00000342287 ASPGQ86U10 573 aa13.76□□□□□ -0.21
PBX3-201ENST00000342287 ZNF761Q86XN6 746 aaPredicted RBP13.76□□□□□ -0.21
PBX3-201ENST00000342287 ZDHHC13Q8IUH4 622 aa13.76□□□□□ -0.21
PBX3-201ENST00000342287 MMP21Q8N119 569 aa13.76□□□□□ -0.21
PBX3-201ENST00000342287 ZNF565Q8N9K5 539 aa13.76□□□□□ -0.21
PBX3-201ENST00000342287 SETD6Q8TBK2 473 aa13.76□□□□□ -0.21
PBX3-201ENST00000342287 LINC00052Q96N35 136 aa13.76□□□□□ -0.21
PBX3-201ENST00000342287 SLC30A2Q9BRI3 323 aa13.76□□□□□ -0.21
PBX3-201ENST00000342287 SPATA2Q9UM82 520 aa13.76□□□□□ -0.21
PBX3-201ENST00000342287 CORO2BQ9UQ03 480 aa13.76□□□□□ -0.21
PBX3-201ENST00000342287 LOC100130705A0A1B0GUX0 176 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms