RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 ZNF806P0C7X5 589 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 HSD3B1P14060 373 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 IDSP22304 550 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 HSD3B2P26439 372 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 LIM2P55344 173 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 RAB8AP61006 207 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 CRHR2Q13324 411 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 TRAM1Q15629 374 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 PAN3Q58A45 887 aaKnown RBP17.43■□□□□ 0.38
SMPD1-201ENST00000342245 ZNF660Q6AZW8 331 aaPredicted RBP17.43■□□□□ 0.38
SMPD1-201ENST00000342245 SFXN4Q6P4A7 337 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 ARMC10Q8N2F6 343 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 ASB13Q8WXK3 278 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 CFAP97Q9P2B7 532 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 CAMK2AQ9UQM7 478 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 RASD1Q9Y272 281 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 WDR90Q96KV7 1748 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 GREB1Q4ZG55 1949 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 KDM4EB2RXH2 506 aaPredicted RBP17.43■□□□□ 0.38
SMPD1-201ENST00000342245 CHURC1-FNTBB4DL54 471 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 DISC1C4P0D8 188 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 CDC123O75794 336 aaPredicted RBP17.43■□□□□ 0.38
SMPD1-201ENST00000342245 IL5P05113 134 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 UBBP0CG47 229 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 UBCP0CG48 685 aaKnown RBP17.43■□□□□ 0.38
SMPD1-201ENST00000342245 SYN1P17600 705 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 CD53P19397 219 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 SOX18P35713 384 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 STARP49675 285 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 TBX4P57082 545 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 AP3S2P59780 193 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 RPS27AP62979 156 aaKnown RBP17.43■□□□□ 0.38
SMPD1-201ENST00000342245 UBA52P62987 128 aaKnown RBP17.43■□□□□ 0.38
SMPD1-201ENST00000342245 IRF5Q13568 498 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 SYTL3Q4VX76 610 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 EOGTQ5NDL2 527 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 PRAMEF19Q5SWL8 479 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 FBXO16Q8IX29 292 aaPredicted RBP17.43■□□□□ 0.38
SMPD1-201ENST00000342245 PNPLA2Q96AD5 504 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 DMRTA2Q96SC8 542 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 TSNAXQ99598 290 aaKnown RBP17.43■□□□□ 0.38
SMPD1-201ENST00000342245 PIGMQ9H3S5 423 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 ARL15Q9NXU5 204 aa17.43■□□□□ 0.38
SMPD1-201ENST00000342245 UGDHO60701 494 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 URODP06132 367 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 SPI1P17947 270 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 GSTM3P21266 225 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 PTPRRQ15256 657 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 SF1Q15637 639 aaKnown RBP17.42■□□□□ 0.38
SMPD1-201ENST00000342245 GPRC6AQ5T6X5 926 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 LYPLAL1Q5VWZ2 237 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 LRRC56Q8IYG6 542 aaPredicted RBP17.42■□□□□ 0.38
SMPD1-201ENST00000342245 SLC44A3Q8N4M1 653 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 IQCF1Q8N6M8 205 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 SCAMP5Q8TAC9 235 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 SP7Q8TDD2 431 aaPredicted RBP17.42■□□□□ 0.38
SMPD1-201ENST00000342245 HAVCR2Q8TDQ0 301 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 JAM3Q9BX67 310 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 EXOSC3Q9NQT5 275 aaKnown RBP17.42■□□□□ 0.38
SMPD1-201ENST00000342245 SDHAF3Q9NRP4 125 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 PATJQ8NI35 1801 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 NEDD8-MDP1E9PL57 170 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 CNMDO75829 334 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 SIX6O95475 246 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 RECKO95980 971 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 DRD5P21918 477 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 OR1E1P30953 314 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 RPIAP49247 311 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 ZNF155Q12901 538 aaPredicted RBP17.42■□□□□ 0.38
SMPD1-201ENST00000342245 MFSD14CQ5VZR4 134 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 SLC9B2Q86UD5 537 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 BMPERQ8N8U9 685 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 OR11G2Q8NGC1 345 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 OR10K1Q8NGX5 313 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 APOBEC4Q8WW27 367 aaKnown RBP17.42■□□□□ 0.38
SMPD1-201ENST00000342245 ACBD6Q9BR61 282 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 BPIFA1Q9NP55 256 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 TAS2R5Q9NYW4 299 aa17.42■□□□□ 0.38
SMPD1-201ENST00000342245 TRPM7Q96QT4 1865 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 MGAT4DA6NG13 374 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 ANKRD66B4E2M5 251 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 PGRMC2O15173 223 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 ARPC5O15511 151 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 RNF13O43567 381 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 SERPIND1P05546 499 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 SAGP10523 405 aaPredicted RBP17.41■□□□□ 0.38
SMPD1-201ENST00000342245 ACVRL1P37023 503 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 DGCR2P98153 550 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 LIPJQ5W064 366 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 LRRN1Q6UXK5 716 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 SCD5Q86SK9 330 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 NR2C2APQ86WQ0 139 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 LPPQ93052 612 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 RNF39Q9H2S5 420 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 ANKRD19PQ9H560 264 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 UCK1Q9HA47 277 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 DENND4AQ7Z401 1863 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 NME6O75414 186 aaPredicted RBP17.41■□□□□ 0.38
SMPD1-201ENST00000342245 EGFP01133 1207 aa17.41■□□□□ 0.38
SMPD1-201ENST00000342245 WNT1P04628 370 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms