RNA–Protein interactions for RNA: ENST00000339598.7

OTOF-203, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-203ENST00000339598 C17orf99Q6UX52 265 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 TMEM173Q86WV6 379 aaPredicted RBP11.81□□□□□ -0.52
OTOF-203ENST00000339598 PELI2Q9HAT8 420 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 THSD1Q9NS62 852 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 ZNF226Q9NYT6 803 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 ERVK-19Q9WJR5 959 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 COL14A1Q05707 1796 aaKnown RBP11.81□□□□□ -0.52
OTOF-203ENST00000339598 KRBA1A5PL33 1030 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 SLC10A3P09131 477 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 CFL1P23528 166 aaKnown RBP11.81□□□□□ -0.52
OTOF-203ENST00000339598 RORAP35398 523 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 HTR2BP41595 481 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 PITPNBP48739 271 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 PAQR9Q6ZVX9 377 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 LAS2Q8IYD9 372 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 VWA5B2Q8N398 1253 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 OR9A2Q8NGT5 310 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 MFSD8Q8NHS3 518 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 TRMT10AQ8TBZ6 339 aaKnown RBP11.81□□□□□ -0.52
OTOF-203ENST00000339598 MACROD1Q9BQ69 325 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 SLC6A16Q9GZN6 736 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.81□□□□□ -0.52
OTOF-203ENST00000339598 SACM1LQ9NTJ5 587 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 HIF3AQ9Y2N7 669 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 MRPS14O60783 128 aaKnown RBP11.81□□□□□ -0.52
OTOF-203ENST00000339598 AMY2AP04746 511 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 SOX9P48436 509 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 CAPZA1P52907 286 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 HOXC5Q00444 222 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 GNMTQ14749 295 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 PKDCCQ504Y2 493 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 GARNL3Q5VVW2 1013 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 ANKRD54Q6NXT1 300 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 ACOT4Q8N9L9 421 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 MS4A4EQ96PG1 132 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 WASF3Q9UPY6 502 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 IFT172Q9UG01 1749 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 AKAP12Q02952 1782 aa11.81□□□□□ -0.52
OTOF-203ENST00000339598 HMX3A6NHT5 357 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 VSTM5A8MXK1 200 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 DUX1O43812 170 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 KCNJ13O60928 360 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 CRHBPP24387 322 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 HTR2AP28223 471 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 POLR2IP36954 125 aaKnown RBP11.8□□□□□ -0.52
OTOF-203ENST00000339598 MECP2P51608 486 aaKnown RBP11.8□□□□□ -0.52
OTOF-203ENST00000339598 NR0B1P51843 470 aaKnown RBP11.8□□□□□ -0.52
OTOF-203ENST00000339598 TAZQ16635 292 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 FCRLBQ6BAA4 426 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 HMBOX1Q6NT76 420 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 LIPIQ6XZB0 460 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 ZNF534Q76KX8 674 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 EGFL6Q8IUX8 553 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 MAFIPQ8WZ33 124 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 NINJ1Q92982 152 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 LPAR4Q99677 370 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 SYNPO2LQ9H987 977 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 HCFC1R1Q9NWW0 138 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 USP36Q9P275 1121 aaKnown RBP11.8□□□□□ -0.52
OTOF-203ENST00000339598 KLHL9Q9P2J3 617 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 RABL2AQ9UBK7 228 aaPredicted RBP11.8□□□□□ -0.52
OTOF-203ENST00000339598 RABL2BQ9UNT1 228 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 AK6Q9Y3D8 172 aaKnown RBP11.8□□□□□ -0.52
OTOF-203ENST00000339598 PRSS21Q9Y6M0 314 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.8□□□□□ -0.52
OTOF-203ENST00000339598 ZNF705EA8MWA4 302 aaPredicted RBP11.8□□□□□ -0.52
OTOF-203ENST00000339598 UPK1BO75841 260 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 SSTR4P31391 388 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 ACTBP60709 375 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 ACTG1P63261 375 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 NKX3-2P78367 333 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 TP53I3Q53FA7 332 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 RAB41Q5JT25 222 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 DESI1Q6ICB0 168 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 MTFR2Q6P444 385 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 GPR149Q86SP6 731 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 TOR1AIP2Q8NFQ8 470 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 SNIP1Q8TAD8 396 aaKnown RBP11.8□□□□□ -0.52
OTOF-203ENST00000339598 ZNF480Q8WV37 535 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 UBXN10Q96LJ8 280 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 NECAB3Q96P71 396 aaPredicted RBP11.8□□□□□ -0.52
OTOF-203ENST00000339598 SLC7A7Q9UM01 511 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 CEPT1Q9Y6K0 416 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 C7orf72A4D263 438 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 AGTR1P30556 359 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 RAB11BQ15907 218 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 MPP7Q5T2T1 576 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 RAET1LQ5VY80 246 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 SLC18B1Q6NT16 456 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 RNF175Q8N4F7 328 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 ZNF709Q8N972 641 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 BADQ92934 168 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 FAM46BQ96A09 425 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 KLF16Q9BXK1 252 aaPredicted RBP11.8□□□□□ -0.52
OTOF-203ENST00000339598 LOC105369274A0A096LPK9 316 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 ZNF850A8MQ14 1090 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 ATE1O95260 518 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 AKR1C4P17516 323 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 PRSS3P35030 304 aa11.8□□□□□ -0.52
OTOF-203ENST00000339598 SMN1Q16637 294 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms