RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 NXF3Q9H4D5 531 aaKnown RBP9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 TDRD3Q9H7E2 651 aaKnown RBP9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 SERHLQ9NQF3 203 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 SIRT7Q9NRC8 400 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 SIX4Q9UIU6 781 aa9.1□□□□□ -0.95
PTCHD4-201ENST00000339488 IFITM10A6NMD0 228 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 TGM5O43548 720 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 CD2P06729 351 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 PRKAR2AP13861 404 aaKnown RBP9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 DAOP14920 347 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 KDELR2P33947 212 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 OR10A3P58181 314 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 NAE1Q13564 534 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 CRY2Q49AN0 593 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 B3GNTL1Q67FW5 361 aaPredicted RBP9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 RAB12Q6IQ22 244 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 ANGPTL8Q6UXH0 198 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 RNF165Q6ZSG1 346 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 THEM5Q8N1Q8 247 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 HIST1H2BAQ96A08 127 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 PPP1R16AQ96I34 528 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 SGIP1Q9BQI5 828 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 ZPBPQ9BS86 351 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 FZD10Q9ULW2 581 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 HOXC6P09630 235 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 CXCL8P10145 99 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 UQCRC2P22695 453 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 AVPR2P30518 371 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 MPIP34949 423 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 CHI3L1P36222 383 aaPredicted RBP9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 CRYBA2P53672 197 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 PNLIPRP2P54317 469 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 F2RL1P55085 397 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 NUTF2P61970 127 aaKnown RBP9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 SEMG2Q02383 582 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 GPRC6AQ5T6X5 926 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 FAM27D1Q5T7N8 215 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 AADACL4Q5VUY2 407 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 DCAF12L2Q5VW00 463 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 FOXRED2Q8IWF2 684 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 TCEANCQ8N8B7 351 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 ORAI3Q9BRQ5 295 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 LAT2Q9GZY6 243 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 TMPRSS5Q9H3S3 457 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 SEMA6CQ9H3T2 930 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 HEBP1Q9NRV9 189 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 ZNF629Q9UEG4 869 aaPredicted RBP9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 IL20RAQ9UHF4 553 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 PCTPQ9UKL6 214 aa9.09□□□□□ -0.95
PTCHD4-201ENST00000339488 TMEM88BA6NKF7 163 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 SOD1P00441 154 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 ETFAP13804 333 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 CPT2P23786 658 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 ADORA2BP29275 332 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 CALCRP30988 508 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 KIR3DL1P43629 444 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 LSM6P62312 80 aaKnown RBP9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 MAT1AQ00266 395 aaKnown RBP9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 SORDQ00796 357 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 TIAL1Q01085 375 aaKnown RBP eCLIP9.08□□□□□ -0.964e-6■■■□□ 17
PTCHD4-201ENST00000339488 TRA2AQ13595 282 aaKnown RBP eCLIP9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 ABHD15Q6UXT9 468 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 CEACAM20Q6UY09 585 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 QSOX2Q6ZRP7 698 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 AQP11Q8NBQ7 271 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 DNAAF1Q8NEP3 725 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 OR2L5Q8NG80 312 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 OR4A15Q8NGL6 344 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 THOC3Q96J01 351 aaKnown RBP9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 C7orf34Q96L11 122 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 TSSK3Q96PN8 268 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 OPA3Q9H6K4 179 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 WDR26Q9H7D7 661 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 CNOT2Q9NZN8 540 aaKnown RBP9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 ZNF219Q9P2Y4 722 aaPredicted RBP9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 ZDHHC8Q9ULC8 765 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 NEU3Q9UQ49 428 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 STYXL1Q9Y6J8 313 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 OTOFQ9HC10 1997 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 SEMG1P04279 462 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 GNSP15586 552 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 SDHAP31040 664 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 SLC6A4P31645 630 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 CCR9P51686 369 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 H2BFSP57053 126 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 GABREP78334 506 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 SLC9A5Q14940 896 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 ATXN7L3Q14CW9 347 aaPredicted RBP9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 TCEAL6Q6IPX3 200 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 OR2W3Q7Z3T1 314 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 CTU1Q7Z7A3 348 aaKnown RBP9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 Q8NFD4 153 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 OR11G2Q8NGC1 345 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 OR51S1Q8NGJ8 323 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 OR51Q1Q8NH59 317 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 NUBPLQ8TB37 319 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 GPBAR1Q8TDU6 330 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 MASTLQ96GX5 879 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 C2orf88Q9BSF0 95 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 FSD1LQ9BXM9 530 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms