RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 TMEM173Q86WV6 379 aaPredicted RBP13□□□□□ -0.33
RTN4-202ENST00000337526 MEX3DQ86XN8 651 aaKnown RBP13□□□□□ -0.33
RTN4-202ENST00000337526 GGHQ92820 318 aa13□□□□□ -0.33
RTN4-202ENST00000337526 CPEB1Q9BZB8 566 aaKnown RBP13□□□□□ -0.33
RTN4-202ENST00000337526 MCCC2Q9HCC0 563 aa13□□□□□ -0.33
RTN4-202ENST00000337526 ASB6Q9NWX5 421 aa13□□□□□ -0.33
RTN4-202ENST00000337526 KLHL9Q9P2J3 617 aa13□□□□□ -0.33
RTN4-202ENST00000337526 C19orf25Q9UFG5 118 aaPredicted RBP13□□□□□ -0.33
RTN4-202ENST00000337526 OR52A4PA6NMU1 304 aa13□□□□□ -0.33
RTN4-202ENST00000337526 UBFD1O14562 309 aaKnown RBP13□□□□□ -0.33
RTN4-202ENST00000337526 PGCP20142 388 aa13□□□□□ -0.33
RTN4-202ENST00000337526 S100A2P29034 98 aa13□□□□□ -0.33
RTN4-202ENST00000337526 CTXN1P60606 82 aa13□□□□□ -0.33
RTN4-202ENST00000337526 WDR5P61964 334 aaKnown RBP13□□□□□ -0.33
RTN4-202ENST00000337526 RAB40BQ12829 278 aa13□□□□□ -0.33
RTN4-202ENST00000337526 C1orf189Q5VU69 101 aa13□□□□□ -0.33
RTN4-202ENST00000337526 DUS1LQ6P1R4 473 aaKnown RBP13□□□□□ -0.33
RTN4-202ENST00000337526 MFSD6LQ8IWD5 586 aa13□□□□□ -0.33
RTN4-202ENST00000337526 ZNF440Q8IYI8 595 aa13□□□□□ -0.33
RTN4-202ENST00000337526 CDRT4Q8N9R6 151 aa13□□□□□ -0.33
RTN4-202ENST00000337526 URM1Q9BTM9 101 aaKnown RBP13□□□□□ -0.33
RTN4-202ENST00000337526 SAP130Q9H0E3 1048 aa13□□□□□ -0.33
RTN4-202ENST00000337526 PCDHB16Q9NRJ7 776 aa13□□□□□ -0.33
RTN4-202ENST00000337526 SLC7A7Q9UM01 511 aa13□□□□□ -0.33
RTN4-202ENST00000337526 RGPD5Q99666 1765 aa13□□□□□ -0.33
RTN4-202ENST00000337526 KCNJ13O60928 360 aa13□□□□□ -0.33
RTN4-202ENST00000337526 TRAPPC6AO75865 159 aa13□□□□□ -0.33
RTN4-202ENST00000337526 PPP1R3DO95685 299 aa13□□□□□ -0.33
RTN4-202ENST00000337526 CCNOP22674 350 aa13□□□□□ -0.33
RTN4-202ENST00000337526 CERS1P27544 350 aa13□□□□□ -0.33
RTN4-202ENST00000337526 GIPRP48546 466 aa13□□□□□ -0.33
RTN4-202ENST00000337526 PTH2RP49190 550 aa13□□□□□ -0.33
RTN4-202ENST00000337526 PRKXP51817 358 aa13□□□□□ -0.33
RTN4-202ENST00000337526 ALG10Q5BKT4 473 aa13□□□□□ -0.33
RTN4-202ENST00000337526 LEG1Q6P5S2 330 aa13□□□□□ -0.33
RTN4-202ENST00000337526 HAGHLQ6PII5 290 aaPredicted RBP13□□□□□ -0.33
RTN4-202ENST00000337526 PGBD5Q8N414 524 aa13□□□□□ -0.33
RTN4-202ENST00000337526 GALNT11Q8NCW6 608 aa13□□□□□ -0.33
RTN4-202ENST00000337526 OR9A2Q8NGT5 310 aa13□□□□□ -0.33
RTN4-202ENST00000337526 THAP3Q8WTV1 239 aaPredicted RBP13□□□□□ -0.33
RTN4-202ENST00000337526 MS4A4EQ96PG1 132 aa13□□□□□ -0.33
RTN4-202ENST00000337526 TSNAXQ99598 290 aaKnown RBP13□□□□□ -0.33
RTN4-202ENST00000337526 CPPED1Q9BRF8 314 aaPredicted RBP13□□□□□ -0.33
RTN4-202ENST00000337526 PINK1Q9BXM7 581 aa13□□□□□ -0.33
RTN4-202ENST00000337526 TRPM3Q9HCF6 1732 aaPredicted RBP12.99□□□□□ -0.33
RTN4-202ENST00000337526 BRWD1Q9NSI6 2320 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 CLDN24A6NM45 220 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 SLC10A3P09131 477 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 GJA5P36382 358 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 RPL19P84098 196 aaKnown RBP12.99□□□□□ -0.33
RTN4-202ENST00000337526 HES5Q5TA89 166 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 ACOT4Q8N9L9 421 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 ZMYND19Q96E35 227 aaPredicted RBP12.99□□□□□ -0.33
RTN4-202ENST00000337526 PEX11GQ96HA9 241 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 A0A1W2PQ09 198 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 PET100P0DJ07 73 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 CLRN1P58418 232 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 SEMA3BQ13214 749 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 AGAP6Q5VW22 663 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 TAS1R1Q7RTX1 841 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 NOXA1Q86UR1 476 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 AGAP4Q96P64 663 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 MEIOCA2RUB1 952 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 WASHC1A8K0Z3 465 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 AGTR1P30556 359 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 PTGER1P34995 402 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 HOXC5Q00444 222 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 SGCAQ16586 387 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 TMEM205Q6UW68 189 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 WASH2PQ6VEQ5 465 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 PARP16Q8N5Y8 322 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 OR2T11Q8NH01 316 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 ISL2Q96A47 359 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 FKBP10Q96AY3 582 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 PRRC1Q96M27 445 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 B3GAT2Q9NPZ5 323 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 CYP8B1Q9UNU6 501 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 LOC105369274A0A096LPK9 316 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 NTSR1P30989 418 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 PTPRRQ15256 657 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 PLEKHN1Q494U1 663 aaPredicted RBP12.99□□□□□ -0.33
RTN4-202ENST00000337526 NKAPLQ5M9Q1 402 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 NADSYN1Q6IA69 706 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 HTR3DQ70Z44 454 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 OR4N4Q8N0Y3 316 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 CPXM2Q8N436 756 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 OR13F1Q8NGS4 319 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 TGM7Q96PF1 710 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 ZNF701Q9NV72 531 aaPredicted RBP12.99□□□□□ -0.33
RTN4-202ENST00000337526 DZANK1Q9NVP4 752 aa12.99□□□□□ -0.33
RTN4-202ENST00000337526 AK6Q9Y3D8 172 aaKnown RBP12.99□□□□□ -0.33
RTN4-202ENST00000337526 LAMB4A4D0S4 1761 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 NWD2Q9ULI1 1742 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 TRAV18A0A075B6X5 111 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 HEXBP07686 556 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 TP53I3Q53FA7 332 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 FCRLBQ6BAA4 426 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 PDZD3Q86UT5 571 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 OR5W2Q8NH69 310 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 TMEM239Q8WW34 195 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms