RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 CLEC3AO75596 197 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 CRTAPO75718 401 aaPredicted RBP9.32□□□□□ -0.92
COL4A6-201ENST00000334504 APOA2P02652 100 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 HOXB9P17482 250 aaPredicted RBP9.32□□□□□ -0.92
COL4A6-201ENST00000334504 DCTP40126 519 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 CX3CR1P49238 355 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 CDKN2DP55273 166 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 UGT3A2Q3SY77 523 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 CERS5Q8N5B7 392 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 HPSE2Q8WWQ2 592 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 OCSTAMPQ9BR26 566 aa9.32□□□□□ -0.92
COL4A6-201ENST00000334504 MMP20O60882 483 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 NCR1O76036 304 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 SNHG28P0DPA3 235 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 SLC5A2P31639 672 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 DLX5P56178 289 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 ZNF33BQ06732 778 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 GALNT1Q10472 559 aaPredicted RBP9.31□□□□□ -0.92
COL4A6-201ENST00000334504 ENTHD1Q8IYW4 607 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 SAMD8Q96LT4 415 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 ZNF597Q96LX8 424 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 PATZ1Q9HBE1 687 aaKnown RBP9.31□□□□□ -0.92
COL4A6-201ENST00000334504 GKN1Q9NS71 199 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 FAM86C1Q9NVL1 165 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 LUZP4Q9P127 313 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 BOLA1Q9Y3E2 137 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 PREX1Q8TCU6 1659 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 NPIPA2E9PIF3 369 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 NPIPA3F8WFD2 350 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 KDELR3O43731 214 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 ONECUT3O60422 494 aaPredicted RBP9.31□□□□□ -0.92
COL4A6-201ENST00000334504 RAC2P15153 192 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 NAT1P18440 290 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 FPGSQ05932 587 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 RPS26P11Q5JNZ5 115 aaPredicted RBP9.31□□□□□ -0.92
COL4A6-201ENST00000334504 NRARPQ7Z6K4 114 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 LACC1Q8IV20 430 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 OR52H1Q8NGJ2 320 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 MITD1Q8WV92 249 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 G6PC3Q9BUM1 346 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 A0A0B4J2A0 478 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 C17orf113A0A1B0GUU1 675 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 RAD1O60671 282 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 HTR3BO95264 441 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 ERVFC1P60507 584 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 PSPHP78330 225 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 MBTPS1Q14703 1052 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 ARHGAP40Q5TG30 622 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 RCBTB1Q8NDN9 531 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 RHOXF1Q8NHV9 184 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 SLC35F5Q8WV83 523 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 LINC01599Q8WXQ3 324 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 KCTD13Q8WZ19 329 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 UFSP2Q9NUQ7 469 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 WRAP73Q9P2S5 460 aaPredicted RBP9.31□□□□□ -0.92
COL4A6-201ENST00000334504 SHPKQ9UHJ6 478 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 H7BY64 318 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 PLSCR1O15162 318 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 FANCGO15287 622 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 STK17BO94768 372 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 FABP6P51161 128 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 SF3B4Q15427 424 aaKnown RBP eCLIP9.31□□□□□ -0.92
COL4A6-201ENST00000334504 TIGD5Q53EQ6 642 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 CELF2-AS1Q8N7Q2 184 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 PXT1Q8NFP0 134 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 RHEBL1Q8TAI7 183 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 PRAP1Q96NZ9 151 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 SPIN2AQ99865 258 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 SPIN2BQ9BPZ2 258 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 INPP5KQ9BT40 448 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 PCDHGA5Q9Y5G8 931 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 A0A0D9SG52 128 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 CACNG3O60359 315 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 PFKLP17858 780 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 FAM189BP81408 668 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 OR4D1Q15615 310 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 C2orf27AQ580R0 203 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 ADGRF1Q5T601 910 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 LYPD4Q6UWN0 246 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 APOOLQ6UXV4 268 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 RFPL4BQ6ZWI9 263 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 NRMQ8IXM6 262 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 ACDQ96AP0 544 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 FBXL2Q9UKC9 423 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 POLHQ9Y253 713 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 KCNK6Q9Y257 313 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 NAALAD2Q9Y3Q0 740 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 JRKO75564 520 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 BMP4P12644 408 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 PKLRP30613 574 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 DUSP7Q16829 419 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 DUSP28Q4G0W2 176 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 PLEKHS1Q5SXH7 462 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 HACD4Q5VWC8 232 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 TPRG1Q6ZUI0 275 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 Q6ZVU0 165 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 OR4K5Q8NGD3 323 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 RSC1A1Q92681 617 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 ZDHHC12Q96GR4 267 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 PITX2Q99697 317 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms