RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 A6NNC1 897 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 B4DXG7 233 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 H0Y3Z8 333 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 LINC01387J3KSC0 135 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 RGS14O43566 566 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 FADS1O60427 444 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 ZIC3O60481 467 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 IL33O95760 270 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 KRT4P19013 534 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 FRKP42685 505 aaPredicted RBP12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 PSMD4P55036 377 aaKnown RBP12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 CLDN18P56856 261 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 RIPPLY3P57055 190 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 ZNF155Q12901 538 aaPredicted RBP12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 GAB1Q13480 694 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 PCLAFQ15004 111 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 TMEM107Q6UX40 140 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 LRRN4CLQ8ND94 238 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 OR4N2Q8NGD1 307 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 GOT1L1Q8NHS2 421 aaPredicted RBP12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 EFHD2Q96C19 240 aaPredicted RBP12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 CCT7Q99832 543 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 FOXC2Q99958 501 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 G6PC3Q9BUM1 346 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 POLDIP3Q9BY77 421 aaKnown RBP12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 PIGMQ9H3S5 423 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 C3orf14Q9HBI5 128 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 HHATLQ9HCP6 504 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 Q9N2J8 555 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 SDHAF3Q9NRP4 125 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 DDX18Q9NVP1 670 aaKnown RBP12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 C1orf109Q9NX04 203 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 DKKL1Q9UK85 242 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 CBLCQ9ULV8 474 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 EDARQ9UNE0 448 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 TMED5Q9Y3A6 229 aa12.31□□□□□ -0.44
GTF3C6-201ENST00000329970 CLCA1A8K7I4 914 aa12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 AZIN1O14977 448 aa12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 TRIM13O60858 407 aa12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 CRHP06850 196 aa12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 FGF4P08620 206 aa12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 EPXP11678 715 aa12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 PEPDP12955 493 aa12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 TACR1P25103 407 aa12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 DPP4P27487 766 aa12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 MAP3K8P41279 467 aa12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 B3GALT5-AS1P59052 145 aa12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 OCRLQ01968 901 aa12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 ZNHIT3Q15649 155 aaPredicted RBP12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 DECR1Q16698 335 aa12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 GLYR1Q49A26 553 aaPredicted RBP12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 Q6ZSR9 355 aa12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 CCDC63Q8NA47 563 aa12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 OR2M3Q8NG83 312 aa12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 EPS8L3Q8TE67 593 aaKnown RBP12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 TRIM44Q96DX7 344 aaPredicted RBP12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 EGLN2Q96KS0 407 aa12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 SFXN2Q96NB2 322 aa12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 GPATCH1Q9BRR8 931 aaKnown RBP12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 IQCGQ9H095 443 aaKnown RBP12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 CLEC4MQ9H2X3 399 aaPredicted RBP12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 LRTM1Q9HBL6 345 aa12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 FAM120CQ9NX05 1096 aaKnown RBP12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 NTMQ9P121 344 aa12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 PPP4R1LQ9P1A2 415 aa12.3□□□□□ -0.44
GTF3C6-201ENST00000329970 IGLV3-32A0A0A0MS00 114 aa12.29□□□□□ -0.44
GTF3C6-201ENST00000329970 TUBAL3A6NHL2 446 aa12.29□□□□□ -0.44
GTF3C6-201ENST00000329970 SEC22BO75396 215 aa12.29□□□□□ -0.44
GTF3C6-201ENST00000329970 NME6O75414 186 aaPredicted RBP12.29□□□□□ -0.44
GTF3C6-201ENST00000329970 NUDT17P0C025 328 aa12.29□□□□□ -0.44
GTF3C6-201ENST00000329970 CLK3P49761 638 aaKnown RBP12.29□□□□□ -0.44
GTF3C6-201ENST00000329970 DGKQP52824 942 aa12.29□□□□□ -0.44
GTF3C6-201ENST00000329970 ART1P52961 327 aa12.29□□□□□ -0.44
GTF3C6-201ENST00000329970 IST1P53990 364 aa12.29□□□□□ -0.44
GTF3C6-201ENST00000329970 PDE7AQ13946 482 aa12.29□□□□□ -0.44
GTF3C6-201ENST00000329970 KANK2Q63ZY3 851 aa12.29□□□□□ -0.44
GTF3C6-201ENST00000329970 CLEC6AQ6EIG7 209 aa12.29□□□□□ -0.44
GTF3C6-201ENST00000329970 C10orf107Q8IVU9 208 aa12.29□□□□□ -0.44
GTF3C6-201ENST00000329970 OR4K17Q8NGC6 315 aa12.29□□□□□ -0.44
GTF3C6-201ENST00000329970 ZFP28Q8NHY6 868 aa12.29□□□□□ -0.44
GTF3C6-201ENST00000329970 CDC26Q8NHZ8 85 aa12.29□□□□□ -0.44
GTF3C6-201ENST00000329970 MTERF3Q96E29 417 aa12.29□□□□□ -0.44
GTF3C6-201ENST00000329970 ZBED6CLQ96FA7 236 aaPredicted RBP12.29□□□□□ -0.44
GTF3C6-201ENST00000329970 APOPT1Q96IL0 206 aa12.29□□□□□ -0.44
GTF3C6-201ENST00000329970 GATA5Q9BWX5 397 aaPredicted RBP12.29□□□□□ -0.44
GTF3C6-201ENST00000329970 PTGES2Q9H7Z7 377 aa12.29□□□□□ -0.44
GTF3C6-201ENST00000329970 ACSS1Q9NUB1 689 aaPredicted RBP12.29□□□□□ -0.44
GTF3C6-201ENST00000329970 ST6GALNAC2Q9UJ37 374 aa12.29□□□□□ -0.44
GTF3C6-201ENST00000329970 ZFHX3Q15911 3703 aa12.29□□□□□ -0.44
GTF3C6-201ENST00000329970 EEF1E1-BLOC1S5C9J1V9 151 aa12.28□□□□□ -0.44
GTF3C6-201ENST00000329970 LSM1O15116 133 aaKnown RBP12.28□□□□□ -0.44
GTF3C6-201ENST00000329970 PDPK1O15530 556 aa12.28□□□□□ -0.44
GTF3C6-201ENST00000329970 EEF1E1O43324 174 aaKnown RBP12.28□□□□□ -0.44
GTF3C6-201ENST00000329970 NPHS1O60500 1241 aa12.28□□□□□ -0.44
GTF3C6-201ENST00000329970 NKX2-2O95096 273 aa12.28□□□□□ -0.44
GTF3C6-201ENST00000329970 CHEK2O96017 543 aa12.28□□□□□ -0.44
GTF3C6-201ENST00000329970 NGFRP08138 427 aa12.28□□□□□ -0.44
GTF3C6-201ENST00000329970 PRPS2P11908 318 aa12.28□□□□□ -0.44
GTF3C6-201ENST00000329970 DDX5P17844 614 aaKnown RBP12.28□□□□□ -0.44
GTF3C6-201ENST00000329970 SDC1P18827 310 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms