RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 COL26A1Q96A83 441 aa20.9■□□□□ 0.94
PNKP-201ENST00000322344 SLC41A3Q96GZ6 507 aa20.9■□□□□ 0.94
PNKP-201ENST00000322344 C6orf106Q9H6K1 298 aaPredicted RBP20.9■□□□□ 0.94
PNKP-201ENST00000322344 TXNL4BQ9NX01 149 aaKnown RBP20.9■□□□□ 0.94
PNKP-201ENST00000322344 DAPP1Q9UN19 280 aa20.9■□□□□ 0.94
PNKP-201ENST00000322344 SPIN1Q9Y657 262 aaPredicted RBP20.9■□□□□ 0.94
PNKP-201ENST00000322344 CHD9Q3L8U1 2897 aa20.9■□□□□ 0.94
PNKP-201ENST00000322344 A6NCN8 305 aa20.89■□□□□ 0.93
PNKP-201ENST00000322344 MAGP20916 626 aa20.89■□□□□ 0.93
PNKP-201ENST00000322344 CD300CQ08708 224 aa20.89■□□□□ 0.93
PNKP-201ENST00000322344 HYAL1Q12794 435 aa20.89■□□□□ 0.93
PNKP-201ENST00000322344 PLK5Q496M5 336 aa20.89■□□□□ 0.93
PNKP-201ENST00000322344 ABHD13Q7L211 337 aa20.89■□□□□ 0.93
PNKP-201ENST00000322344 GDF7Q7Z4P5 450 aa20.89■□□□□ 0.93
PNKP-201ENST00000322344 CLDN22Q8N7P3 220 aa20.89■□□□□ 0.93
PNKP-201ENST00000322344 SETD6Q8TBK2 473 aa20.89■□□□□ 0.93
PNKP-201ENST00000322344 ITFG2Q969R8 447 aa20.89■□□□□ 0.93
PNKP-201ENST00000322344 SDHCQ99643 169 aaPredicted RBP20.89■□□□□ 0.93
PNKP-201ENST00000322344 IL20Q9NYY1 176 aa20.89■□□□□ 0.93
PNKP-201ENST00000322344 NLGN3Q9NZ94 848 aa20.89■□□□□ 0.93
PNKP-201ENST00000322344 KLF4O43474 513 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 THBS1P07996 1170 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 UGT2B7P16662 529 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 TYW3Q6IPR3 259 aaKnown RBP20.88■□□□□ 0.93
PNKP-201ENST00000322344 FIGLAQ6QHK4 219 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 TMPRSS11AQ6ZMR5 421 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 TRIM73Q86UV7 250 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 MEX3DQ86XN8 651 aaKnown RBP20.88■□□□□ 0.93
PNKP-201ENST00000322344 NKAIN4Q8IVV8 208 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 ZCCHC10Q8TBK6 192 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 TSACCQ96A04 125 aaPredicted RBP20.88■□□□□ 0.93
PNKP-201ENST00000322344 SLC25A46Q96AG3 418 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 MRPL38Q96DV4 380 aaKnown RBP20.88■□□□□ 0.93
PNKP-201ENST00000322344 BMFQ96LC9 184 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 RIPOR3Q96MK2 946 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 LYRM4Q9HD34 91 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 CAB39Q9Y376 341 aaPredicted RBP20.88■□□□□ 0.93
PNKP-201ENST00000322344 SLC22A7Q9Y694 548 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 SNPHO15079 494 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 RGS5O15539 181 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 KCNK2O95069 426 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 EGFP01133 1207 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 CPMP14384 443 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 HNRNPA2B1P22626 353 aaKnown RBP20.88■□□□□ 0.93
PNKP-201ENST00000322344 PSPHP78330 225 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 MLLT1Q03111 559 aaPredicted RBP20.88■□□□□ 0.93
PNKP-201ENST00000322344 DUSP8Q13202 625 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 RUNX2Q13950 521 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 DEFB134Q4QY38 66 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 UFD1Q92890 307 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 TMCO6Q96DC7 493 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 MED18Q9BUE0 208 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 KLHL25Q9H0H3 589 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 CARD8Q9Y2G2 431 aa20.88■□□□□ 0.93
PNKP-201ENST00000322344 EPOPA6NHQ4 379 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 P2RX6O15547 441 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 CDRT1O95170 752 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 GNSP15586 552 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 CTHP32929 405 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 CDH11P55287 796 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 MAP4K2Q12851 820 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 SHHQ15465 462 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 FCRL6Q6DN72 434 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 DGLUCYQ7Z3D6 616 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 CCL4L1Q8NHW4 92 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 ZFPM2Q8WW38 1151 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 TMEM168Q9H0V1 697 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 NKX2-4Q9H2Z4 354 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 PIGUQ9H490 435 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 ACTR10Q9NZ32 417 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 PILRAQ9UKJ1 303 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 C19orf53Q9UNZ5 99 aaPredicted RBP20.87■□□□□ 0.93
PNKP-201ENST00000322344 GPR52Q9Y2T5 361 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 CMAHPQ9Y471 501 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 MDC1Q14676 2089 aaKnown RBP20.87■□□□□ 0.93
PNKP-201ENST00000322344 SLC30A4O14863 429 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 SURF4O15260 269 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 CTSVO60911 334 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 RASGRP1O95267 797 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 HMGN1P05114 100 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 SIM1P81133 766 aaPredicted RBP20.87■□□□□ 0.93
PNKP-201ENST00000322344 PGGHGQ32M88 737 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 AADACL4Q5VUY2 407 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 DESI1Q6ICB0 168 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 ZNF836Q6ZNA1 936 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 ZNF620Q6ZNG0 422 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 GDPD3Q7L5L3 318 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 NRMQ8IXM6 262 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 POGLUT1Q8NBL1 392 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 OR4Q3Q8NH05 313 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 CHAC2Q8WUX2 184 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 ASB15Q8WXK1 588 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 RSC1A1Q92681 617 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 KCTD7Q96MP8 289 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 CA5BQ9Y2D0 317 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 CDH10Q9Y6N8 788 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 SPACA6W5XKT8 324 aa20.87■□□□□ 0.93
PNKP-201ENST00000322344 TRBV23OR9-2A0A075B6M9 112 aa20.86■□□□□ 0.93
PNKP-201ENST00000322344 H0Y8X5 98 aa20.86■□□□□ 0.93
PNKP-201ENST00000322344 NARSO43776 548 aaKnown RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms