RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 IL17RDQ8NFM7 739 aa14.4□□□□□ -0.1
VARS2-201ENST00000321897 RPLP0P6Q8NHW5 317 aa14.4□□□□□ -0.1
VARS2-201ENST00000321897 DNAJA4Q8WW22 397 aaPredicted RBP14.4□□□□□ -0.1
VARS2-201ENST00000321897 IL21Q9HBE4 155 aa14.4□□□□□ -0.1
VARS2-201ENST00000321897 GPN1Q9HCN4 374 aaPredicted RBP14.4□□□□□ -0.1
VARS2-201ENST00000321897 CIB4A0PJX0 185 aa14.4□□□□□ -0.1
VARS2-201ENST00000321897 CARNS1A5YM72 827 aa14.4□□□□□ -0.1
VARS2-201ENST00000321897 B3GALT2O43825 422 aa14.4□□□□□ -0.1
VARS2-201ENST00000321897 GASTP01350 101 aa14.4□□□□□ -0.1
VARS2-201ENST00000321897 GYPBP06028 91 aa14.4□□□□□ -0.1
VARS2-201ENST00000321897 MICAQ29983 383 aa14.4□□□□□ -0.1
VARS2-201ENST00000321897 ARRDC3Q96B67 414 aa14.4□□□□□ -0.1
VARS2-201ENST00000321897 DTD2Q96FN9 168 aa14.4□□□□□ -0.1
VARS2-201ENST00000321897 TRMT2BQ96GJ1 504 aaKnown RBP14.4□□□□□ -0.1
VARS2-201ENST00000321897 SLC6A15Q9H2J7 730 aa14.4□□□□□ -0.1
VARS2-201ENST00000321897 PCDHGB2Q9Y5G2 931 aa14.4□□□□□ -0.1
VARS2-201ENST00000321897 SCN3AQ9NY46 2000 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 OR6C74A6NCV1 312 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 PRRT4C9JH25 899 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 LDB3O75112 727 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 ARHGEF15O94989 841 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 ALDOBP05062 364 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 ARSBP15848 533 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 CST6Q15828 149 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 SLC25A36Q96CQ1 311 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 SPNS1Q9H2V7 528 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 RANBP3Q9H6Z4 567 aaPredicted RBP14.39□□□□□ -0.11
VARS2-201ENST00000321897 CXorf36Q9H7Y0 433 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 EVA1BQ9NVM1 165 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 HRASLS2Q9NWW9 162 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 MED11Q9P086 117 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 ANTXRLA6NF34 631 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 BLOC1S5-TXNDC5H3BN57 136 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 ARPC5O15511 151 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 FGF19O95750 216 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 DDX6P26196 483 aaKnown RBP eCLIP14.39□□□□□ -0.11
VARS2-201ENST00000321897 ZNF91Q05481 1191 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 PRPF38BQ5VTL8 546 aaKnown RBP14.39□□□□□ -0.11
VARS2-201ENST00000321897 SERPINA11Q86U17 422 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 NRMQ8IXM6 262 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 FKBP10Q96AY3 582 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 MCCC1Q96RQ3 725 aaPredicted RBP14.39□□□□□ -0.11
VARS2-201ENST00000321897 PHF11Q9UIL8 331 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 FBXL3Q9UKT7 428 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 RIIAD1A6NNX1 92 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 ITGA3P26006 1051 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 GIFP27352 417 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 DDOSTP39656 456 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 GCGRP47871 477 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 FGL2Q14314 439 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 TOMM20Q15388 145 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 KDM4DQ6B0I6 523 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 SLITRK4Q8IW52 837 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 OR5P2Q8WZ92 322 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 CHFRQ96EP1 664 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 MSRAQ9UJ68 235 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 FKBP7Q9Y680 259 aa14.39□□□□□ -0.11
VARS2-201ENST00000321897 NCOR1O75376 2440 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 SPTA1P02549 2419 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 HYAL3O43820 417 aaPredicted RBP14.38□□□□□ -0.11
VARS2-201ENST00000321897 NPPBP16860 134 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 CHMP24386 653 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 ACADLP28330 430 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 SLC7A9P82251 487 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 ALKAL2Q6UX46 152 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 SLCO4C1Q6ZQN7 724 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 HPF1Q9NWY4 346 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 TAS2R3Q9NYW6 316 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 OSGIN1Q9UJX0 560 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 PIKFYVEQ9Y2I7 2098 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 SLC16A5O15375 505 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 FADDQ13158 208 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 HNRNPA1L2Q32P51 320 aaKnown RBP14.38□□□□□ -0.11
VARS2-201ENST00000321897 HSD17B12Q53GQ0 312 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 LRRN1Q6UXK5 716 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 MSRB3Q8IXL7 192 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 NKD1Q969G9 470 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 FOLH1BQ9HBA9 442 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 MARK1Q9P0L2 795 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 TMEFF2Q9UIK5 374 aaPredicted RBP14.38□□□□□ -0.11
VARS2-201ENST00000321897 H2AFB2P0C5Z0 115 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 RHCEP18577 417 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 SOX2P48431 317 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 CDC20Q12834 499 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 KCNC3Q14003 757 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 LNX2Q8N448 690 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 SMARCD2Q92925 531 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 EGLN3Q9H6Z9 239 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 FKBP14Q9NWM8 211 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 SLC39A1Q9NY26 324 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 USP36Q9P275 1121 aaKnown RBP14.38□□□□□ -0.11
VARS2-201ENST00000321897 FBXL21Q9UKT6 434 aa14.38□□□□□ -0.11
VARS2-201ENST00000321897 PRSS23O95084 383 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 KLF8O95600 359 aaPredicted RBP14.37□□□□□ -0.11
VARS2-201ENST00000321897 HIST1H2ABP04908 130 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 GABRA3P34903 492 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 RUNX3Q13761 415 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 HIST3H2AQ7L7L0 130 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 SFTPA1Q8IWL2 248 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 OR5J2Q8NH18 312 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms