RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 SHC1P29353 583 aa16.79■□□□□ 0.28
PRKCB-202ENST00000321728 TAS2R41P59536 307 aa16.79■□□□□ 0.28
PRKCB-202ENST00000321728 TMEM115Q12893 351 aaPredicted RBP16.79■□□□□ 0.28
PRKCB-202ENST00000321728 ZSWIM7Q19AV6 140 aa16.79■□□□□ 0.28
PRKCB-202ENST00000321728 FIBINQ8TAL6 211 aa16.79■□□□□ 0.28
PRKCB-202ENST00000321728 GNPDA2Q8TDQ7 276 aa16.79■□□□□ 0.28
PRKCB-202ENST00000321728 CPEB1Q9BZB8 566 aaKnown RBP16.79■□□□□ 0.28
PRKCB-202ENST00000321728 PPA2Q9H2U2 334 aa16.79■□□□□ 0.28
PRKCB-202ENST00000321728 H2AFY2Q9P0M6 372 aaPredicted RBP16.79■□□□□ 0.28
PRKCB-202ENST00000321728 TNFRSF10DQ9UBN6 386 aa16.79■□□□□ 0.28
PRKCB-202ENST00000321728 IL20RAQ9UHF4 553 aa16.79■□□□□ 0.28
PRKCB-202ENST00000321728 SCML1Q9UN30 329 aa16.79■□□□□ 0.28
PRKCB-202ENST00000321728 PPIEQ9UNP9 301 aaKnown RBP16.79■□□□□ 0.28
PRKCB-202ENST00000321728 PLPP1O14494 284 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 TRIM23P36406 574 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 OR10A3P58181 314 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 ST3GAL2Q16842 350 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 FAM27D1Q5T7N8 215 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 GDPD4Q6W3E5 623 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 LRRC56Q8IYG6 542 aaPredicted RBP16.78■□□□□ 0.28
PRKCB-202ENST00000321728 CMTM8Q8IZV2 173 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 OR52N1Q8NH53 320 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 HGDQ93099 445 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 TM4SF18Q96CE8 201 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 SCLYQ96I15 445 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 SLC35G5Q96KT7 338 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 SGPP1Q9BX95 441 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 ZC4H2Q9NQZ6 224 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 DNAH14Q0VDD8 3507 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 A0A1B0GVI7 797 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 A0A1W2PPL8 197 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 M0R233 179 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 BET1O15155 118 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 SOX30O94993 753 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 EPPINO95925 133 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 HRGP04196 525 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 IFNGR2P38484 337 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 PRLHRP49683 370 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 PRKAG1P54619 331 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 ACSM1Q08AH1 577 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 SLC36A2Q495M3 483 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 GARNL3Q5VVW2 1013 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 SMARCD3Q6STE5 483 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 MRGPREQ86SM8 312 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 ADGRG3Q86Y34 549 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 MS4A15Q8N5U1 240 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 TRAM1L1Q8N609 369 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 OR51G2Q8NGK0 314 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 OR2T35Q8NGX2 323 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 GIMAP1Q8WWP7 306 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 ZFP3Q96NJ6 502 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 F2RL3Q96RI0 385 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 TBX5Q99593 518 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 ZNF649Q9BS31 505 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 YIPF4Q9BSR8 244 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 GSX2Q9BZM3 304 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 SPRTNQ9H040 489 aaPredicted RBP16.78■□□□□ 0.28
PRKCB-202ENST00000321728 DLL4Q9NR61 685 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 TDP1Q9NUW8 608 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 TMEM5Q9Y2B1 443 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 CSNK1G3Q9Y6M4 447 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 STON1Q9Y6Q2 735 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 MYO10Q9HD67 2058 aa16.78■□□□□ 0.28
PRKCB-202ENST00000321728 MEIKINA0A087WXM9 373 aa16.77■□□□□ 0.28
PRKCB-202ENST00000321728 MANSC4A6NHS7 340 aaPredicted RBP16.77■□□□□ 0.28
PRKCB-202ENST00000321728 NPR2P20594 1047 aa16.77■□□□□ 0.28
PRKCB-202ENST00000321728 AADACL4Q5VUY2 407 aa16.77■□□□□ 0.28
PRKCB-202ENST00000321728 PYHIN1Q6K0P9 492 aa16.77■□□□□ 0.28
PRKCB-202ENST00000321728 KIAA0907Q7Z7F0 614 aaPredicted RBP16.77■□□□□ 0.28
PRKCB-202ENST00000321728 GPAT4Q86UL3 456 aa16.77■□□□□ 0.28
PRKCB-202ENST00000321728 SIAH3Q8IW03 269 aa16.77■□□□□ 0.28
PRKCB-202ENST00000321728 SRFBP1Q8NEF9 429 aaKnown RBP16.77■□□□□ 0.28
PRKCB-202ENST00000321728 UBE2E3Q969T4 207 aa16.77■□□□□ 0.28
PRKCB-202ENST00000321728 TEX12Q9BXU0 123 aa16.77■□□□□ 0.28
PRKCB-202ENST00000321728 QRSL1Q9H0R6 528 aaKnown RBP16.77■□□□□ 0.28
PRKCB-202ENST00000321728 ERVMER34-1Q9H9K5 563 aa16.77■□□□□ 0.28
PRKCB-202ENST00000321728 ZNF334Q9HCZ1 680 aaPredicted RBP16.77■□□□□ 0.28
PRKCB-202ENST00000321728 KLHL1Q9NR64 748 aa16.77■□□□□ 0.28
PRKCB-202ENST00000321728 CFAP97Q9P2B7 532 aa16.77■□□□□ 0.28
PRKCB-202ENST00000321728 XIRP2A4UGR9 3374 aa16.77■□□□□ 0.28
PRKCB-202ENST00000321728 NRG2O14511 850 aaPredicted RBP16.77■□□□□ 0.27
PRKCB-202ENST00000321728 FRS3O43559 492 aa16.77■□□□□ 0.27
PRKCB-202ENST00000321728 FZD7O75084 574 aa16.77■□□□□ 0.27
PRKCB-202ENST00000321728 RB1P06400 928 aa16.77■□□□□ 0.27
PRKCB-202ENST00000321728 CKMP06732 381 aa16.77■□□□□ 0.27
PRKCB-202ENST00000321728 H2AFB2P0C5Z0 115 aa16.77■□□□□ 0.27
PRKCB-202ENST00000321728 VIPR1P32241 457 aa16.77■□□□□ 0.27
PRKCB-202ENST00000321728 MAPK9P45984 424 aa16.77■□□□□ 0.27
PRKCB-202ENST00000321728 TSPAN31Q12999 210 aa16.77■□□□□ 0.27
PRKCB-202ENST00000321728 SFXN4Q6P4A7 337 aa16.77■□□□□ 0.27
PRKCB-202ENST00000321728 FTMTQ8N4E7 242 aa16.77■□□□□ 0.27
PRKCB-202ENST00000321728 OR9A1PQ8NGU1 263 aa16.77■□□□□ 0.27
PRKCB-202ENST00000321728 OR4Q3Q8NH05 313 aa16.77■□□□□ 0.27
PRKCB-202ENST00000321728 ZNF461Q8TAF7 563 aa16.77■□□□□ 0.27
PRKCB-202ENST00000321728 TRMT10AQ8TBZ6 339 aaKnown RBP16.77■□□□□ 0.27
PRKCB-202ENST00000321728 TRMT2BQ96GJ1 504 aaKnown RBP16.77■□□□□ 0.27
PRKCB-202ENST00000321728 SCP2D1Q9UJQ7 156 aa16.77■□□□□ 0.27
PRKCB-202ENST00000321728 FKBP7Q9Y680 259 aa16.77■□□□□ 0.27
PRKCB-202ENST00000321728 SIRT4Q9Y6E7 314 aaPredicted RBP16.77■□□□□ 0.27
PRKCB-202ENST00000321728 SOCS6O14544 535 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms