RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 SNTNA6NMZ2 147 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 MYL12BO14950 172 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 SEMA7AO75326 666 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 SLC22A5O76082 557 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 NTN1O95631 604 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 MYL12AP19105 171 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 TNNI3P19429 210 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 CERS1P27544 350 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 TEKQ02763 1124 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 LRRC32Q14392 662 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 ZNF267Q14586 743 aaPredicted RBP14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 LCN1P1Q5VSP4 162 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 TMEM65Q6PI78 240 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 GPR32P1Q8NGA4 272 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 OR4D11Q8NGI4 311 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 TSACCQ96A04 125 aaPredicted RBP14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 SLC17A9Q9BYT1 436 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 OR51I1Q9H343 314 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 SERHL2Q9H4I8 314 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 DIABLOQ9NR28 239 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 SEMA3GQ9NS98 782 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 GDE1Q9NZC3 331 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 NUP50Q9UKX7 468 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 ATG4BQ9Y4P1 393 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 ENPP4Q9Y6X5 453 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 TEX51A0A1B0GUA7 166 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 HMGN4O00479 90 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 FABP7O15540 132 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 IFNA14P01570 189 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 ARSBP15848 533 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 BUD31P41223 144 aaPredicted RBP14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 PPP2CBP62714 309 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 PPP2CAP67775 309 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 ABATP80404 500 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 SEC23BQ15437 767 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 OR4C11Q6IEV9 310 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 COMTD1Q86VU5 262 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 SHISA5Q8N114 240 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 IQCF1Q8N6M8 205 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 C16orf58Q96GQ5 468 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 TMEM80Q96HE8 168 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 SLC6A18Q96N87 628 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 SPATA9Q9BWV2 254 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 TMEM38AQ9H6F2 299 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 RBFOX1Q9NWB1 397 aaKnown RBP14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 COMMD3Q9UBI1 195 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 SSR3Q9UNL2 185 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 ARHGEF17Q96PE2 2063 aaPredicted RBP14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 ZAR1LA6NP61 321 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 GTPBP1O00178 669 aaKnown RBP14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 TSPAN9O75954 239 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 RECKO95980 971 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 CEACAM5P06731 702 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 XCR1P46094 333 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 RAB28P51157 221 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 AGFG1P52594 562 aaKnown RBP14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 SNRPNP63162 240 aaKnown RBP14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 PRDX1Q06830 199 aaKnown RBP14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 RBBP4Q09028 425 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 RPA4Q13156 261 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 POU4F3Q15319 338 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 FRMPD2BQ6IN97 320 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 TMEM107Q6UX40 140 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 Q8N402 240 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 MSANTD3Q96H12 275 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 TREX2Q9BQ50 279 aaPredicted RBP14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 GLIPR2Q9H4G4 154 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 SIRT3Q9NTG7 399 aaPredicted RBP14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 NDUFB11Q9NX14 153 aa14.6□□□□□ -0.07
SHROOM1-201ENST00000319854 FAM240BA0A1B0GVZ2 78 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 RNGTTO60942 597 aaKnown RBP14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 APOL3O95236 402 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 SLC2A2P11168 524 aaPredicted RBP14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 PCSK2P16519 638 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 ATF4P18848 351 aaPredicted RBP14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 PER3P56645 1201 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 DUSP2Q05923 314 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 MFSD13AQ14CX5 517 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 OR5P2Q8WZ92 322 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 PDXPQ96GD0 296 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 RSPH9Q9H1X1 276 aaPredicted RBP14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 TMCC3Q9ULS5 477 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 MDC1Q14676 2089 aaKnown RBP14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 VPS13AQ96RL7 3174 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 PRAMEF27A3QJZ7 478 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 SH3D21A4FU49 640 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 LRIT2A6NDA9 550 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 PDE9AO76083 593 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 IGFALSP35858 605 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 VASPP50552 380 aaPredicted RBP14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 DLX2Q07687 328 aaPredicted RBP14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 MAB21L1Q13394 359 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 ITPRIPL2Q3MIP1 535 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 ENPP7Q6UWV6 458 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 KCTD20Q7Z5Y7 419 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 OR4N5Q8IXE1 308 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 TMEFF1Q8IYR6 380 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 RAB42Q8N4Z0 105 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 KCT2Q8NC54 265 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 DUSP18Q8NEJ0 188 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms