RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 LEXMQ3ZCV2 418 aa8.47□□□□□ -1.05
CTC1-201ENST00000315684 LIN54Q6MZP7 749 aa8.47□□□□□ -1.05
CTC1-201ENST00000315684 MAMDC2Q7Z304 686 aaPredicted RBP8.47□□□□□ -1.05
CTC1-201ENST00000315684 FOXRED2Q8IWF2 684 aa8.47□□□□□ -1.05
CTC1-201ENST00000315684 FAM129BQ96TA1 746 aa8.47□□□□□ -1.05
CTC1-201ENST00000315684 QRSL1Q9H0R6 528 aaKnown RBP8.47□□□□□ -1.05
CTC1-201ENST00000315684 NOSIPQ9Y314 301 aaKnown RBP8.47□□□□□ -1.05
CTC1-201ENST00000315684 IGHV1OR15-9A0A0B4J2B8 117 aa8.47□□□□□ -1.05
CTC1-201ENST00000315684 FAM90A27PA6NNH2 459 aa8.47□□□□□ -1.05
CTC1-201ENST00000315684 FMO6PO60774 539 aa8.47□□□□□ -1.05
CTC1-201ENST00000315684 ST6GAL1P15907 406 aa8.47□□□□□ -1.05
CTC1-201ENST00000315684 CD1CP29017 333 aa8.47□□□□□ -1.05
CTC1-201ENST00000315684 BCL6P41182 706 aa8.47□□□□□ -1.05
CTC1-201ENST00000315684 PRKXP51817 358 aa8.47□□□□□ -1.05
CTC1-201ENST00000315684 LRIF1Q5T3J3 769 aa8.47□□□□□ -1.05
CTC1-201ENST00000315684 SLC41A3Q96GZ6 507 aa8.47□□□□□ -1.05
CTC1-201ENST00000315684 CHST8Q9H2A9 424 aa8.47□□□□□ -1.05
CTC1-201ENST00000315684 HMG20AQ9NP66 347 aa8.47□□□□□ -1.05
CTC1-201ENST00000315684 GPR52Q9Y2T5 361 aa8.47□□□□□ -1.05
CTC1-201ENST00000315684 SPEF1Q9Y4P9 236 aa8.47□□□□□ -1.05
CTC1-201ENST00000315684 KIAA1217Q5T5P2 1943 aa8.47□□□□□ -1.05
CTC1-201ENST00000315684 IGHV3-64DA0A0J9YX35 117 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 SNPHO15079 494 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 IGHEP01854 428 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 FECHP22830 423 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 LHCGRP22888 699 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 PSMA1P25786 263 aaKnown RBP8.46□□□□□ -1.05
CTC1-201ENST00000315684 PEX2P28328 305 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 ADH7P40394 386 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 VRK2Q86Y07 508 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 LINC00471Q8N535 108 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 GPR150Q8NGU9 434 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 OSTF1Q92882 214 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 BARD1Q99728 777 aaKnown RBP8.46□□□□□ -1.05
CTC1-201ENST00000315684 WDR83Q9BRX9 315 aaKnown RBP8.46□□□□□ -1.05
CTC1-201ENST00000315684 UCKL1Q9NWZ5 548 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 A0A1W2PRQ8 180 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 ARPC4P59998 168 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 KLHL22Q53GT1 634 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 SLC22A10Q63ZE4 541 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 NIPAL3Q6P499 406 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 THAP4Q8WY91 577 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 FAM71F1Q96KD3 344 aaPredicted RBP8.46□□□□□ -1.05
CTC1-201ENST00000315684 WDR37Q9Y2I8 494 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 CNTRLQ7Z7A1 2325 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 MROH6A6NGR9 719 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 HMGN2P05204 90 aaKnown RBP8.46□□□□□ -1.05
CTC1-201ENST00000315684 RANBP1P43487 201 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 RAB15P59190 212 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 ADAM8P78325 824 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 GINS1Q14691 196 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 VTCN1Q7Z7D3 282 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 DNAJB8Q8NHS0 232 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 POMPQ9Y244 141 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 POLHQ9Y253 713 aa8.46□□□□□ -1.05
CTC1-201ENST00000315684 LOC105369274A0A096LPK9 316 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 CBX3Q13185 183 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 TAB1Q15750 504 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 MRPL21Q7Z2W9 205 aaKnown RBP8.46□□□□□ -1.06
CTC1-201ENST00000315684 MARCH3Q86UD3 253 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 WFDC8Q8IUA0 241 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 OR4N4Q8N0Y3 316 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 GOT1L1Q8NHS2 421 aaPredicted RBP8.46□□□□□ -1.06
CTC1-201ENST00000315684 ASB11Q8WXH4 323 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 AP3S1Q92572 193 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 ZNF597Q96LX8 424 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 SLC6A16Q9GZN6 736 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 KLHL31Q9H511 634 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 CRNNQ9UBG3 495 aaPredicted RBP8.46□□□□□ -1.06
CTC1-201ENST00000315684 SLC23A2Q9UGH3 650 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 EMC9Q9Y3B6 208 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 TAF1LQ8IZX4 1826 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 SHANK3Q9BYB0 1731 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 UBE2QL1A1L167 161 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 ANTXRLA6NF34 631 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 H3BUI4 141 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 IMPA1P29218 277 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 CCR5P51681 352 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 SMCO1Q147U7 214 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 TIFABQ6ZNK6 161 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 CLEC14AQ86T13 490 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 SVOPLQ8N434 492 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 TLCD1Q96CP7 247 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 PIP5K1AQ99755 562 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 OR10A5Q9H207 317 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 SSU72Q9NP77 194 aaKnown RBP8.46□□□□□ -1.06
CTC1-201ENST00000315684 AREL1O15033 823 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 PENKP01210 267 aaPredicted RBP8.46□□□□□ -1.06
CTC1-201ENST00000315684 DDCP20711 480 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 CLDN17P56750 224 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 GSCP56915 257 aaPredicted RBP8.46□□□□□ -1.06
CTC1-201ENST00000315684 RAB38P57729 211 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 ARL5BQ96KC2 179 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 MUC13Q9H3R2 512 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 CCDC86Q9H6F5 360 aaKnown RBP8.46□□□□□ -1.06
CTC1-201ENST00000315684 MTHFD2LQ9H903 347 aaPredicted RBP8.46□□□□□ -1.06
CTC1-201ENST00000315684 CLK4Q9HAZ1 481 aaKnown RBP8.46□□□□□ -1.06
CTC1-201ENST00000315684 LRFN1Q9P244 771 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 LIPT1Q9Y234 373 aa8.46□□□□□ -1.06
CTC1-201ENST00000315684 CCDC187A0A096LP49 1063 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms