RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 SLC22A9Q8IVM8 553 aa7.4□□□□□ -1.22
TPM3-203ENST00000312970 CTAGE4Q8IX94 777 aa7.4□□□□□ -1.22
TPM3-203ENST00000312970 C9orf106Q8NAJ2 232 aa7.4□□□□□ -1.22
TPM3-203ENST00000312970 RDH11Q8TC12 318 aa7.4□□□□□ -1.22
TPM3-203ENST00000312970 C16orf78Q8WTQ4 265 aa7.4□□□□□ -1.22
TPM3-203ENST00000312970 KAT2AQ92830 837 aa7.4□□□□□ -1.22
TPM3-203ENST00000312970 EXOSC8Q96B26 276 aaKnown RBP7.4□□□□□ -1.22
TPM3-203ENST00000312970 SLC35A4Q96G79 324 aa7.4□□□□□ -1.22
TPM3-203ENST00000312970 ZFP3Q96NJ6 502 aa7.4□□□□□ -1.22
TPM3-203ENST00000312970 BTBD9Q96Q07 612 aa7.4□□□□□ -1.22
TPM3-203ENST00000312970 ADOQ96SZ5 270 aa7.4□□□□□ -1.22
TPM3-203ENST00000312970 TUBA1CQ9BQE3 449 aa7.4□□□□□ -1.22
TPM3-203ENST00000312970 OR2B2Q9GZK3 357 aa7.4□□□□□ -1.22
TPM3-203ENST00000312970 GSX1Q9H4S2 264 aaPredicted RBP7.4□□□□□ -1.22
TPM3-203ENST00000312970 ANKRA2Q9H9E1 313 aa7.4□□□□□ -1.22
TPM3-203ENST00000312970 SLC35C2Q9NQQ7 365 aa7.4□□□□□ -1.22
TPM3-203ENST00000312970 GIMAP4Q9NUV9 329 aa7.4□□□□□ -1.22
TPM3-203ENST00000312970 TAS2R10Q9NYW0 307 aa7.4□□□□□ -1.22
TPM3-203ENST00000312970 TAS2R9Q9NYW1 312 aa7.4□□□□□ -1.22
TPM3-203ENST00000312970 EHD3Q9NZN3 535 aa7.4□□□□□ -1.22
TPM3-203ENST00000312970 EXPH5Q8NEV8 1989 aa7.4□□□□□ -1.23
TPM3-203ENST00000312970 CSPG4Q6UVK1 2322 aa7.4□□□□□ -1.23
TPM3-203ENST00000312970 H0Y3Z8 333 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 PLOD3O60568 738 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 TSPAN2O60636 221 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 GOSR1O95249 250 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 ENO1P06733 434 aaKnown RBP7.39□□□□□ -1.23
TPM3-203ENST00000312970 GSTA1P08263 222 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 ABHD2P08910 425 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 KLK2P20151 261 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 CHMP24386 653 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 GCAP28676 217 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 IL12BP29460 328 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 GSTM5P46439 218 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 SLCO1A2P46721 670 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 STARP49675 285 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 PRKAA2P54646 552 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 GFRA1P56159 465 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 CORO7P57737 925 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 PPP2R2AP63151 447 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 MRPS22P82650 360 aaKnown RBP7.39□□□□□ -1.23
TPM3-203ENST00000312970 BTKQ06187 659 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 FOXF2Q12947 444 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 LCP2Q13094 533 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 CEBPEQ15744 281 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 BCL2A1Q16548 175 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 FAM219BQ5XKK7 198 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 OR5M10Q6IEU7 315 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 GALNT18Q6P9A2 607 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 LARP4Q71RC2 724 aaKnown RBP eCLIP7.39□□□□□ -1.231e-8■□□□□ 9.3
TPM3-203ENST00000312970 TRMT10CQ7L0Y3 403 aaKnown RBP7.39□□□□□ -1.23
TPM3-203ENST00000312970 ADGRE4PQ86SQ3 457 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 SLC44A2Q8IWA5 706 aaPredicted RBP7.39□□□□□ -1.23
TPM3-203ENST00000312970 CNPY4Q8N129 248 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 OR9A2Q8NGT5 310 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 LINC01560Q8TB33 94 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 ACMSDQ8TDX5 336 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 INTS12Q96CB8 462 aaKnown RBP7.39□□□□□ -1.23
TPM3-203ENST00000312970 MBD6Q96DN6 1003 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 L3HYPDHQ96EM0 354 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 C11orf24Q96F05 449 aaPredicted RBP7.39□□□□□ -1.23
TPM3-203ENST00000312970 APIPQ96GX9 242 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 VSTM2LQ96N03 204 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 TMEM237Q96Q45 408 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 ALPK1Q96QP1 1244 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 BBS4Q96RK4 519 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 SFXN3Q9BWM7 321 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 RBM24Q9BX46 236 aaKnown RBP7.39□□□□□ -1.23
TPM3-203ENST00000312970 ACPTQ9BZG2 426 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 SHCBP1LQ9BZQ2 653 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 STMN4Q9H169 189 aaPredicted RBP7.39□□□□□ -1.23
TPM3-203ENST00000312970 PIGMQ9H3S5 423 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 FOLH1BQ9HBA9 442 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 SIRT5Q9NXA8 310 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 SENP1Q9P0U3 644 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 DCDC2Q9UHG0 476 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 PLEKHA6Q9Y2H5 1048 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 TIMM22Q9Y584 194 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 WIF1Q9Y5W5 379 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 KIAA1549Q9HCM3 1950 aa7.39□□□□□ -1.23
TPM3-203ENST00000312970 ATRQ13535 2644 aa7.38□□□□□ -1.23
TPM3-203ENST00000312970 CLCA1A8K7I4 914 aa7.38□□□□□ -1.23
TPM3-203ENST00000312970 MYO1GB0I1T2 1018 aa7.38□□□□□ -1.23
TPM3-203ENST00000312970 PLOD2O00469 737 aa7.38□□□□□ -1.23
TPM3-203ENST00000312970 CASKO14936 926 aa7.38□□□□□ -1.23
TPM3-203ENST00000312970 RIPK2O43353 540 aa7.38□□□□□ -1.23
TPM3-203ENST00000312970 ZIC3O60481 467 aa7.38□□□□□ -1.23
TPM3-203ENST00000312970 NME6O75414 186 aaPredicted RBP7.38□□□□□ -1.23
TPM3-203ENST00000312970 RAF1P04049 648 aa7.38□□□□□ -1.23
TPM3-203ENST00000312970 ANXA4P09525 319 aaPredicted RBP7.38□□□□□ -1.23
TPM3-203ENST00000312970 GRK2P25098 689 aa7.38□□□□□ -1.23
TPM3-203ENST00000312970 DPP4P27487 766 aa7.38□□□□□ -1.23
TPM3-203ENST00000312970 TIA1P31483 386 aaKnown RBP eCLIP7.38□□□□□ -1.23
TPM3-203ENST00000312970 HTR6P50406 440 aa7.38□□□□□ -1.23
TPM3-203ENST00000312970 LHX2P50458 406 aa7.38□□□□□ -1.23
TPM3-203ENST00000312970 GAS1P54826 345 aa7.38□□□□□ -1.23
TPM3-203ENST00000312970 DIO3P55073 304 aa7.38□□□□□ -1.23
TPM3-203ENST00000312970 DSCR4P56555 118 aaPredicted RBP7.38□□□□□ -1.23
TPM3-203ENST00000312970 NAA20P61599 178 aa7.38□□□□□ -1.23
TPM3-203ENST00000312970 C2orf80Q0P641 193 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms