RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 CT45A8P0DMV1 189 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 CT45A9P0DMV2 189 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 DRD5P21918 477 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 PIGAP37287 484 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 HMGA2P52926 109 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 IST1P53990 364 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 PPP2R2BQ00005 443 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 SPIBQ01892 262 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 CYP27C1Q4G0S4 372 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 LIN52Q52LA3 116 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 CT45A2Q5DJT8 189 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 OTUD3Q5T2D3 398 aaPredicted RBP13.09□□□□□ -0.31
EIF3F-201ENST00000309828 NPSR1Q6W5P4 371 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 RAB11FIP2Q7L804 512 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 OLIG3Q7RTU3 272 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 ANKRD37Q7Z713 158 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 PRSS58Q8IYP2 241 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 OR1N1Q8NGS0 311 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 MAGEE2Q8TD90 523 aaPredicted RBP13.09□□□□□ -0.31
EIF3F-201ENST00000309828 RMND5BQ96G75 393 aaPredicted RBP13.09□□□□□ -0.31
EIF3F-201ENST00000309828 ZNF570Q96NI8 536 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 TAAR9Q96RI9 348 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 SPSB2Q99619 263 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 RSPO3Q9BXY4 272 aaPredicted RBP13.09□□□□□ -0.31
EIF3F-201ENST00000309828 ITPAQ9BY32 194 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 ULBP3Q9BZM4 244 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 OR8D2Q9GZM6 311 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 VNN3Q9NY84 501 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 MRTO4Q9UKD2 239 aaKnown RBP13.09□□□□□ -0.31
EIF3F-201ENST00000309828 ACAD8Q9UKU7 415 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 MKLN1Q9UL63 735 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 CBLCQ9ULV8 474 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 PPIEQ9UNP9 301 aaKnown RBP13.09□□□□□ -0.31
EIF3F-201ENST00000309828 PCDHGA10Q9Y5H3 936 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 LYVE1Q9Y5Y7 322 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 AP4B1Q9Y6B7 739 aa13.09□□□□□ -0.31
EIF3F-201ENST00000309828 CCDC187A0A096LP49 1063 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 FRG2CA6NGY1 282 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 A8MUA0 341 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 CSO75390 466 aaKnown RBP13.08□□□□□ -0.32
EIF3F-201ENST00000309828 ATXN8OSP0DMR3 200 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 NID1P14543 1247 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 IL7RP16871 459 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 ZNF28P17035 718 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 LCN1P31025 176 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 SLC5A2P31639 672 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 TRIP6Q15654 476 aaKnown RBP13.08□□□□□ -0.32
EIF3F-201ENST00000309828 GPR68Q15743 365 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.08□□□□□ -0.32
EIF3F-201ENST00000309828 NHSL2Q5HYW2 709 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 CCNJQ5T5M9 372 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 STPG1Q5TH74 334 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 RNF220Q5VTB9 566 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 FIGNL1Q6PIW4 674 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 TBPL2Q6SJ96 375 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 TMEM205Q6UW68 189 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 ZNF517Q6ZMY9 492 aaPredicted RBP13.08□□□□□ -0.32
EIF3F-201ENST00000309828 TMEM179BQ7Z7N9 219 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 VRK2Q86Y07 508 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 MARVELD2Q8N4S9 558 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 C17orf47Q8NEP4 570 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 OR4C15Q8NGM1 316 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 LCORQ96JN0 433 aaPredicted RBP13.08□□□□□ -0.32
EIF3F-201ENST00000309828 DHRS1Q96LJ7 313 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 NR1H4Q96RI1 486 aaPredicted RBP13.08□□□□□ -0.32
EIF3F-201ENST00000309828 PSD2Q9BQI7 771 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 NUDT9Q9BW91 350 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 POLR2J2Q9GZM3 115 aaKnown RBP13.08□□□□□ -0.32
EIF3F-201ENST00000309828 POLR2J3Q9H1A7 115 aaKnown RBP13.08□□□□□ -0.32
EIF3F-201ENST00000309828 SOX17Q9H6I2 414 aaPredicted RBP13.08□□□□□ -0.32
EIF3F-201ENST00000309828 TOR4AQ9NXH8 423 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 C3orf18Q9UK00 162 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 DTX4Q9Y2E6 619 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 OR10H1Q9Y4A9 318 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 TESMINQ9Y4I5 508 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 PCDHGA3Q9Y5H0 932 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 ORC6Q9Y5N6 252 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 AK5Q9Y6K8 562 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 U3KQV3 271 aa13.08□□□□□ -0.32
EIF3F-201ENST00000309828 SPTBP11277 2137 aa13.07□□□□□ -0.32
EIF3F-201ENST00000309828 ARRDC5A6NEK1 342 aa13.07□□□□□ -0.32
EIF3F-201ENST00000309828 SAGE2PA6NJ88 616 aa13.07□□□□□ -0.32
EIF3F-201ENST00000309828 H0YAE9 185 aa13.07□□□□□ -0.32
EIF3F-201ENST00000309828 DLGAP1O14490 977 aa13.07□□□□□ -0.32
EIF3F-201ENST00000309828 TO15178 435 aa13.07□□□□□ -0.32
EIF3F-201ENST00000309828 GADD45GO95257 159 aa13.07□□□□□ -0.32
EIF3F-201ENST00000309828 EPPINO95925 133 aa13.07□□□□□ -0.32
EIF3F-201ENST00000309828 JMJD7P0C870 316 aa13.07□□□□□ -0.32
EIF3F-201ENST00000309828 THRBP10828 461 aa13.07□□□□□ -0.32
EIF3F-201ENST00000309828 IFNA8P32881 189 aa13.07□□□□□ -0.32
EIF3F-201ENST00000309828 LIMS1P48059 325 aa13.07□□□□□ -0.32
EIF3F-201ENST00000309828 LIMK1P53667 647 aa13.07□□□□□ -0.32
EIF3F-201ENST00000309828 RAD23AP54725 363 aa13.07□□□□□ -0.32
EIF3F-201ENST00000309828 CDH12P55289 794 aa13.07□□□□□ -0.32
EIF3F-201ENST00000309828 EEF1A1P68104 462 aaKnown RBP13.07□□□□□ -0.32
EIF3F-201ENST00000309828 MERTKQ12866 999 aa13.07□□□□□ -0.32
EIF3F-201ENST00000309828 DECR1Q16698 335 aa13.07□□□□□ -0.32
EIF3F-201ENST00000309828 FLYWCH1Q4VC44 716 aa13.07□□□□□ -0.32
EIF3F-201ENST00000309828 CCDC157Q569K6 752 aa13.07□□□□□ -0.32
EIF3F-201ENST00000309828 COLEC12Q5KU26 742 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms