RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 WDR45Q9Y484 360 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 A0A1W2PRQ8 180 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 FAAHO00519 579 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 NKX2-2O95096 273 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 THBS1P07996 1170 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 ZNF806P0C7X5 589 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 FOLR1P15328 257 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 CRHBPP24387 322 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 GALNSP34059 522 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 BTG2P78543 158 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 STX4Q12846 297 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 TOP3AQ13472 1001 aaPredicted RBP11.06□□□□□ -0.64
TRIM40-205ENST00000307859 DGCR6Q14129 220 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 NPTX1Q15818 432 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 SNAP47Q5SQN1 464 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 DCST2Q5T1A1 773 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 YOD1Q5VVQ6 348 aaPredicted RBP11.06□□□□□ -0.64
TRIM40-205ENST00000307859 GUSBP11Q6P575 273 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 TMEM71Q6P5X7 295 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 RABEPKQ7Z6M1 372 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 TSPYL5Q86VY4 417 aaPredicted RBP11.06□□□□□ -0.64
TRIM40-205ENST00000307859 ZNF619Q8N2I2 560 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 METTL27Q8N6F8 245 aaPredicted RBP11.06□□□□□ -0.64
TRIM40-205ENST00000307859 COX18Q8N8Q8 333 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 OR52R1Q8NGF1 315 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 OR52P1PQ8NH57 321 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 ZCCHC14Q8WYQ9 949 aaKnown RBP11.06□□□□□ -0.64
TRIM40-205ENST00000307859 NR4A3Q92570 626 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 RIT1Q92963 219 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 ZNF566Q969W8 418 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 FKBP10Q96AY3 582 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 ZNF578Q96N58 590 aaPredicted RBP11.06□□□□□ -0.64
TRIM40-205ENST00000307859 APOL4Q9BPW4 351 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 NIPSNAP1Q9BPW8 284 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 PELOQ9BRX2 385 aaKnown RBP11.06□□□□□ -0.64
TRIM40-205ENST00000307859 ALOXE3Q9BYJ1 711 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 GAREM1Q9H706 876 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 POLE3Q9NRF9 147 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 LANCL2Q9NS86 450 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 ZNF443Q9Y2A4 671 aaPredicted RBP11.06□□□□□ -0.64
TRIM40-205ENST00000307859 IFT52Q9Y366 437 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 MMACHCQ9Y4U1 282 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 GMPPBQ9Y5P6 360 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 IGF2RP11717 2491 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 AGAP5A6NIR3 686 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 HYAL3O43820 417 aaPredicted RBP11.05□□□□□ -0.64
TRIM40-205ENST00000307859 KIAA0513O60268 411 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 STX11O75558 287 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 CDC123O75794 336 aaPredicted RBP11.05□□□□□ -0.64
TRIM40-205ENST00000307859 UGT2B17O75795 530 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 ADAP00813 363 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 CFIP05156 583 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 GUSBP08236 651 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 ANKRD34CP0C6C1 535 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 EMDP50402 254 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 NUP107P57740 925 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 GABARAPL2P60520 117 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 RPP38P78345 283 aaKnown RBP11.05□□□□□ -0.64
TRIM40-205ENST00000307859 ZNF155Q12901 538 aaPredicted RBP11.05□□□□□ -0.64
TRIM40-205ENST00000307859 CDK5R2Q13319 367 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 BIKQ13323 160 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 SERTAD2Q14140 314 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 ERV3-1Q14264 604 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 MEP1AQ16819 746 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 SOWAHCQ53LP3 525 aaPredicted RBP11.05□□□□□ -0.64
TRIM40-205ENST00000307859 FGD3Q5JSP0 725 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 PERM1Q5SV97 790 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 DCST1Q5T197 706 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 CCNJQ5T5M9 372 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 TTLL10Q6ZVT0 673 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 CCDC71Q8IV32 467 aaPredicted RBP11.05□□□□□ -0.64
TRIM40-205ENST00000307859 PEX5LQ8IYB4 626 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 AQP11Q8NBQ7 271 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 CEP76Q8TAP6 659 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 PMM1Q92871 262 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 ZNF501Q96CX3 271 aaPredicted RBP11.05□□□□□ -0.64
TRIM40-205ENST00000307859 RBM18Q96H35 190 aaKnown RBP11.05□□□□□ -0.64
TRIM40-205ENST00000307859 DGAT2Q96PD7 388 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 OR1F2PQ96R84 312 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 ZNF556Q9HAH1 456 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 FOLH1BQ9HBA9 442 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 MAN2C1Q9NTJ4 1040 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 ENOPH1Q9UHY7 261 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 MKLN1Q9UL63 735 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 TMCC3Q9ULS5 477 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 CDC14AQ9UNH5 594 aa11.05□□□□□ -0.64
TRIM40-205ENST00000307859 RALGAPA1Q6GYQ0 2036 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 SH3PXD2BA1X283 911 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 A8MU76 341 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 SLC1A7O00341 560 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 DSCR3O14972 297 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 PRAMEF2O60811 474 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 CCDC159P0C7I6 412 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 MAOAP21397 527 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 EEF1A1P68104 462 aaKnown RBP11.04□□□□□ -0.64
TRIM40-205ENST00000307859 POU6F2P78424 691 aaPredicted RBP11.04□□□□□ -0.64
TRIM40-205ENST00000307859 PSG6Q00889 435 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 IL5RAQ01344 420 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 FUT7Q11130 342 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 PIN1Q13526 163 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms