RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 CNIH4Q9P003 139 aa15.39■□□□□ 0.05
TVP23B-201ENST00000307767 WDR45Q9Y484 360 aa15.39■□□□□ 0.05
TVP23B-201ENST00000307767 CLDN25C9JDP6 229 aa15.38■□□□□ 0.05
TVP23B-201ENST00000307767 TLX2O43763 284 aaPredicted RBP15.38■□□□□ 0.05
TVP23B-201ENST00000307767 LYPD3O95274 346 aa15.38■□□□□ 0.05
TVP23B-201ENST00000307767 PRG2P13727 222 aa15.38■□□□□ 0.05
TVP23B-201ENST00000307767 ZNF10P21506 573 aaPredicted RBP15.38■□□□□ 0.05
TVP23B-201ENST00000307767 CALRP27797 417 aaKnown RBP15.38■□□□□ 0.05
TVP23B-201ENST00000307767 MLLT1Q03111 559 aaPredicted RBP15.38■□□□□ 0.05
TVP23B-201ENST00000307767 MAP4K2Q12851 820 aa15.38■□□□□ 0.05
TVP23B-201ENST00000307767 TSPAN31Q12999 210 aa15.38■□□□□ 0.05
TVP23B-201ENST00000307767 EXOSC7Q15024 291 aaKnown RBP15.38■□□□□ 0.05
TVP23B-201ENST00000307767 NCF4Q15080 339 aa15.38■□□□□ 0.05
TVP23B-201ENST00000307767 PAQR6Q6TCH4 344 aa15.38■□□□□ 0.05
TVP23B-201ENST00000307767 PARGQ86W56 976 aa15.38■□□□□ 0.05
TVP23B-201ENST00000307767 B4GALNT2Q8NHY0 566 aa15.38■□□□□ 0.05
TVP23B-201ENST00000307767 HOXB13Q92826 284 aaPredicted RBP15.38■□□□□ 0.05
TVP23B-201ENST00000307767 ZHX1-C8orf76Q96EF9 292 aa15.38■□□□□ 0.05
TVP23B-201ENST00000307767 TSSK6Q9BXA6 273 aa15.38■□□□□ 0.05
TVP23B-201ENST00000307767 SEMA6CQ9H3T2 930 aa15.38■□□□□ 0.05
TVP23B-201ENST00000307767 ANKRD19PQ9H560 264 aa15.38■□□□□ 0.05
TVP23B-201ENST00000307767 HHATLQ9HCP6 504 aa15.38■□□□□ 0.05
TVP23B-201ENST00000307767 TESQ9UGI8 421 aaKnown RBP15.38■□□□□ 0.05
TVP23B-201ENST00000307767 B3GNT3Q9Y2A9 372 aa15.38■□□□□ 0.05
TVP23B-201ENST00000307767 A0A1W2PR77 199 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 FAM170BA6NMN3 283 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 TGFBR3LH3BV60 316 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 ARHGAP33O14559 1287 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 RDH16O75452 317 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 SULT1C4O75897 302 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 AGR2O95994 175 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 CKMT1AP12532 417 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 CTSEP14091 401 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 S1PR1P21453 382 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 RGS8P57771 180 aaPredicted RBP15.37■□□□□ 0.05
TVP23B-201ENST00000307767 ST3GAL3Q11203 375 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 SMAD4Q13485 552 aaKnown RBP15.37■□□□□ 0.05
TVP23B-201ENST00000307767 PRTGQ2VWP7 1150 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 MEDAGQ5VYS4 303 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 OOSP2Q86WS3 158 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 AVL9Q8NBF6 648 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 OR9A4Q8NGU2 314 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 WDR36Q8NI36 951 aaKnown RBP15.37■□□□□ 0.05
TVP23B-201ENST00000307767 GNPDA2Q8TDQ7 276 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 NR4A3Q92570 626 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 FAM46AQ96IP4 442 aaKnown RBP15.37■□□□□ 0.05
TVP23B-201ENST00000307767 Q96MT0 163 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 ZNF582Q96NG8 517 aaPredicted RBP15.37■□□□□ 0.05
TVP23B-201ENST00000307767 MCHR1Q99705 422 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 PRSS27Q9BQR3 290 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 PHF7Q9BWX1 381 aaPredicted RBP15.37■□□□□ 0.05
TVP23B-201ENST00000307767 LMAN1LQ9HAT1 526 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 ERGIC3Q9Y282 383 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 CLDN16Q9Y5I7 305 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 METTL15A6NJ78 407 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 B4DGG1 531 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 PIP5K1CO60331 668 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 CNOT3O75175 753 aaKnown RBP15.37■□□□□ 0.05
TVP23B-201ENST00000307767 CBX7O95931 251 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 RPLP0P05388 317 aaKnown RBP15.37■□□□□ 0.05
TVP23B-201ENST00000307767 HBQ1P09105 142 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 GSTM3P21266 225 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 HTR2AP28223 471 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 NR1D2Q14995 579 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 DECR1Q16698 335 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 TSTQ16762 297 aaKnown RBP15.37■□□□□ 0.05
TVP23B-201ENST00000307767 FLYWCH1Q4VC44 716 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 RNLSQ5VYX0 342 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 RASSF6Q6ZTQ3 369 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 ZAR1Q86SH2 424 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 DEFB119Q8N690 84 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 ACOT11Q8WXI4 607 aaPredicted RBP15.37■□□□□ 0.05
TVP23B-201ENST00000307767 TMEM80Q96HE8 168 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 NXF2Q9GZY0 626 aaKnown RBP15.37■□□□□ 0.05
TVP23B-201ENST00000307767 GALNT8Q9NY28 637 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 ETAA1Q9NY74 926 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 SCN2AQ99250 2005 aa15.37■□□□□ 0.05
TVP23B-201ENST00000307767 GON4LQ3T8J9 2241 aa15.36■□□□□ 0.05
TVP23B-201ENST00000307767 NPIPA5A0A0B4J1W7 369 aa15.36■□□□□ 0.05
TVP23B-201ENST00000307767 NPIPA7E9PJI5 369 aa15.36■□□□□ 0.05
TVP23B-201ENST00000307767 PEX12O00623 359 aa15.36■□□□□ 0.05
TVP23B-201ENST00000307767 FOXS1O43638 330 aa15.36■□□□□ 0.05
TVP23B-201ENST00000307767 CSO75390 466 aaKnown RBP15.36■□□□□ 0.05
TVP23B-201ENST00000307767 THBS1P07996 1170 aa15.36■□□□□ 0.05
TVP23B-201ENST00000307767 CCNYL3P0C7X3 344 aa15.36■□□□□ 0.05
TVP23B-201ENST00000307767 HSMCR30P0CW71 290 aa15.36■□□□□ 0.05
TVP23B-201ENST00000307767 NPIPA8P0DM63 369 aa15.36■□□□□ 0.05
TVP23B-201ENST00000307767 NT5EP21589 574 aa15.36■□□□□ 0.05
TVP23B-201ENST00000307767 CSTF2P33240 577 aaKnown RBP eCLIP15.36■□□□□ 0.05
TVP23B-201ENST00000307767 GABRA4P48169 554 aa15.36■□□□□ 0.05
TVP23B-201ENST00000307767 CLK1P49759 484 aaKnown RBP15.36■□□□□ 0.05
TVP23B-201ENST00000307767 RAB38P57729 211 aa15.36■□□□□ 0.05
TVP23B-201ENST00000307767 RHAGQ02094 409 aa15.36■□□□□ 0.05
TVP23B-201ENST00000307767 MED22Q15528 200 aa15.36■□□□□ 0.05
TVP23B-201ENST00000307767 GPR68Q15743 365 aa15.36■□□□□ 0.05
TVP23B-201ENST00000307767 DCST2Q5T1A1 773 aa15.36■□□□□ 0.05
TVP23B-201ENST00000307767 DCDC5Q6ZRR9 648 aa15.36■□□□□ 0.05
TVP23B-201ENST00000307767 TMEM255BQ8WV15 326 aa15.36■□□□□ 0.05
TVP23B-201ENST00000307767 SLC41A3Q96GZ6 507 aa15.36■□□□□ 0.05
TVP23B-201ENST00000307767 CDADC1Q9BWV3 514 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms