RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 RTN4RL1Q86UN2 441 aaPredicted RBP12.69□□□□□ -0.38
SEC23A-201ENST00000307712 LRRTM4Q86VH4 590 aa12.69□□□□□ -0.38
SEC23A-201ENST00000307712 OR4M1Q8NGD0 313 aa12.69□□□□□ -0.38
SEC23A-201ENST00000307712 CWH43Q9H720 699 aa12.69□□□□□ -0.38
SEC23A-201ENST00000307712 MED20Q9H944 212 aa12.69□□□□□ -0.38
SEC23A-201ENST00000307712 TEX10Q9NXF1 929 aaPredicted RBP12.69□□□□□ -0.38
SEC23A-201ENST00000307712 BABAM2Q9NXR7 383 aa12.69□□□□□ -0.38
SEC23A-201ENST00000307712 ARID1AO14497 2285 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 UNC119BA6NIH7 251 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 C1orf105O95561 183 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 CAMK1Q14012 370 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 LYPD8Q6UX82 237 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 TMCO2Q7Z6W1 182 aaPredicted RBP12.68□□□□□ -0.38
SEC23A-201ENST00000307712 IFNL1Q8IU54 200 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 FCAMRQ8WWV6 532 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 MVB12BQ9H7P6 319 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 PHPT1Q9NRX4 125 aaPredicted RBP12.68□□□□□ -0.38
SEC23A-201ENST00000307712 KCNN3Q9UGI6 736 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 TMEM5Q9Y2B1 443 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 LY75O60449 1722 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 TRBV2A0A0J9YWF9 115 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 GFYI3L273 518 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 ITGA10O75578 1167 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 ACADLP28330 430 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 CMPK1P30085 196 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 KCNJ5P48544 419 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 CCR6P51684 374 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 POU6F2P78424 691 aaPredicted RBP12.68□□□□□ -0.38
SEC23A-201ENST00000307712 SEC23BQ15437 767 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 ACSM3Q53FZ2 586 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 HES5Q5TA89 166 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 ZNF676Q8N7Q3 588 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 TP53I13Q8NBR0 393 aaPredicted RBP12.68□□□□□ -0.38
SEC23A-201ENST00000307712 SETD7Q8WTS6 366 aaKnown RBP12.68□□□□□ -0.38
SEC23A-201ENST00000307712 ASB12Q8WXK4 309 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 SDK1Q7Z5N4 2213 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 TRDV1A0A1B0GX56 115 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 OR14I1A6ND48 311 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 UNCXA6NJT0 531 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 FZD6O60353 706 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 GATBO75879 557 aaKnown RBP12.68□□□□□ -0.38
SEC23A-201ENST00000307712 F11P03951 625 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 HIST1H2ABP04908 130 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 GYPBP06028 91 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 SOX18P35713 384 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 CRYBB2P43320 205 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 TMEM69Q5SWH9 247 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 PLPP4Q5VZY2 271 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 SLC22A10Q63ZE4 541 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 CCSAPQ6IQ19 270 aaPredicted RBP12.68□□□□□ -0.38
SEC23A-201ENST00000307712 FAM198BQ6UWH4 519 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 CD300LGQ6UXG3 332 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 HIST3H2AQ7L7L0 130 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 ZER1Q7Z7L7 766 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 GIMAP1Q8WWP7 306 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 LCN9Q8WX39 176 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 IRF7Q92985 503 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 HIST1H2ACQ93077 130 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 NUP50Q9UKX7 468 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 CLEC4EQ9ULY5 219 aa12.68□□□□□ -0.38
SEC23A-201ENST00000307712 URADA6NGE7 173 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 SLC22A31A6NKX4 558 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 ARPC1BO15143 372 aaKnown RBP12.67□□□□□ -0.38
SEC23A-201ENST00000307712 YY2O15391 372 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 CREBL2O60519 120 aaPredicted RBP12.67□□□□□ -0.38
SEC23A-201ENST00000307712 SOD2P04179 222 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 SLC35G6P0C7Q6 338 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 ELK1P19419 428 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 DDX6P26196 483 aaKnown RBP eCLIP12.67□□□□□ -0.383e-6■■■□□ 18.6
SEC23A-201ENST00000307712 HLA-FP30511 346 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 RFX2P48378 723 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 GZMMP51124 257 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 OCLNQ16625 522 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 SMUG1Q53HV7 270 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 FAM71E1Q6IPT2 247 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 JAZF1Q86VZ6 243 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 PARGQ86W56 976 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 VRK2Q86Y07 508 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 TTLQ8NG68 377 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 WDR20Q8TBZ3 569 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 SLC41A3Q96GZ6 507 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 OR2M2Q96R28 347 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 TMEM43Q9BTV4 400 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 H3BNC9 293 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 GTPBP1O00178 669 aaKnown RBP12.67□□□□□ -0.38
SEC23A-201ENST00000307712 SOCS6O14544 535 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 GMFGO60234 142 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 LATS1O95835 1130 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 TCRBP04435 133 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 CD22P20273 847 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 HSD17B2P37059 387 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 TP53I3Q53FA7 332 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 FAM209AQ5JX71 171 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 OR4N5Q8IXE1 308 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 A0A0G2JPF8 293 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 HNRNPCL3B7ZW38 293 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 LRRTM2O43300 516 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 EMC8O43402 210 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 FZD7O75084 574 aa12.67□□□□□ -0.38
SEC23A-201ENST00000307712 HNRNPCL4P0DMR1 293 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms