RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 ACBD4Q8NC06 268 aa24.07■■□□□ 1.44
CDKN2A-201ENST00000304494 TUBGCP3Q96CW5 907 aa24.07■■□□□ 1.44
CDKN2A-201ENST00000304494 TRIM8Q9BZR9 551 aa24.07■■□□□ 1.44
CDKN2A-201ENST00000304494 KCNK9Q9NPC2 374 aa24.07■■□□□ 1.44
CDKN2A-201ENST00000304494 EQTNQ9NQ60 294 aa24.07■■□□□ 1.44
CDKN2A-201ENST00000304494 TAS2R10Q9NYW0 307 aa24.07■■□□□ 1.44
CDKN2A-201ENST00000304494 NTMQ9P121 344 aa24.07■■□□□ 1.44
CDKN2A-201ENST00000304494 CAMK2AQ9UQM7 478 aa24.07■■□□□ 1.44
CDKN2A-201ENST00000304494 CACNA1DQ01668 2161 aa24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 HSPB2A8KAH6 182 aa24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 KCNH1O95259 989 aa24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 IL33O95760 270 aa24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 DHRS4L1P0CG22 281 aa24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 SRD5A2P31213 254 aa24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 GABRA3P34903 492 aa24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 ADH7P40394 386 aa24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 CLK3P49761 638 aaKnown RBP24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 PRKAG1P54619 331 aa24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 GAS1P54826 345 aa24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 ABCE1P61221 599 aaKnown RBP24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 TFF3Q07654 80 aa24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 MAD2L1Q13257 205 aaPredicted RBP24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 MLC1Q15049 377 aa24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 HSPB2Q16082 182 aa24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 MEX3BQ6ZN04 569 aaKnown RBP24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 IFNEQ86WN2 208 aa24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 LACC1Q8IV20 430 aa24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 KIRREL3Q8IZU9 778 aa24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 NATD1Q8N6N6 113 aa24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 CDRT4Q8N9R6 151 aa24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 NUP43Q8NFH3 380 aa24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 WDYHV1Q96HA8 205 aa24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 MS4A4EQ96PG1 132 aa24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 C1orf50Q9BV19 199 aa24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 SDHAF3Q9NRP4 125 aa24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 ATAD3AQ9NVI7 634 aa24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 EIF3LQ9Y262 564 aaKnown RBP24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 MRPS18CQ9Y3D5 142 aaKnown RBP24.06■■□□□ 1.44
CDKN2A-201ENST00000304494 CACNA1CQ13936 2221 aa24.05■■□□□ 1.44
CDKN2A-201ENST00000304494 MSX1P28360 303 aa24.05■■□□□ 1.44
CDKN2A-201ENST00000304494 SLC25A35Q3KQZ1 300 aa24.05■■□□□ 1.44
CDKN2A-201ENST00000304494 IL23RQ5VWK5 629 aa24.05■■□□□ 1.44
CDKN2A-201ENST00000304494 AAGABQ6PD74 315 aa24.05■■□□□ 1.44
CDKN2A-201ENST00000304494 ENPP6Q6UWR7 440 aa24.05■■□□□ 1.44
CDKN2A-201ENST00000304494 SZRD1Q7Z422 152 aa24.05■■□□□ 1.44
CDKN2A-201ENST00000304494 GPR151Q8TDV0 419 aa24.05■■□□□ 1.44
CDKN2A-201ENST00000304494 HOXB13Q92826 284 aaPredicted RBP24.05■■□□□ 1.44
CDKN2A-201ENST00000304494 PRPF18Q99633 342 aaKnown RBP24.05■■□□□ 1.44
CDKN2A-201ENST00000304494 TREX2Q9BQ50 279 aaPredicted RBP24.05■■□□□ 1.44
CDKN2A-201ENST00000304494 FAM120CQ9NX05 1096 aaKnown RBP24.05■■□□□ 1.44
CDKN2A-201ENST00000304494 PPP4R1LQ9P1A2 415 aa24.05■■□□□ 1.44
CDKN2A-201ENST00000304494 DKKL1Q9UK85 242 aa24.05■■□□□ 1.44
CDKN2A-201ENST00000304494 FBXL2Q9UKC9 423 aa24.05■■□□□ 1.44
CDKN2A-201ENST00000304494 EPB41L3Q9Y2J2 1087 aaPredicted RBP24.05■■□□□ 1.44
CDKN2A-201ENST00000304494 EMC8O43402 210 aa24.04■■□□□ 1.44
CDKN2A-201ENST00000304494 ITM2AO43736 263 aa24.04■■□□□ 1.44
CDKN2A-201ENST00000304494 SCO2O43819 266 aa24.04■■□□□ 1.44
CDKN2A-201ENST00000304494 FADS1O60427 444 aa24.04■■□□□ 1.44
CDKN2A-201ENST00000304494 SSTR2P30874 369 aa24.04■■□□□ 1.44
CDKN2A-201ENST00000304494 TIMP3P35625 211 aa24.04■■□□□ 1.44
CDKN2A-201ENST00000304494 PRR5P85299 388 aa24.04■■□□□ 1.44
CDKN2A-201ENST00000304494 PTGR1Q14914 329 aa24.04■■□□□ 1.44
CDKN2A-201ENST00000304494 DCST1Q5T197 706 aa24.04■■□□□ 1.44
CDKN2A-201ENST00000304494 CES4AQ5XG92 561 aa24.04■■□□□ 1.44
CDKN2A-201ENST00000304494 NSUN5P2Q63ZY6 315 aa24.04■■□□□ 1.44
CDKN2A-201ENST00000304494 OR5M10Q6IEU7 315 aa24.04■■□□□ 1.44
CDKN2A-201ENST00000304494 SEM1Q6ZVN7 128 aa24.04■■□□□ 1.44
CDKN2A-201ENST00000304494 OR7A2PQ8NGA2 310 aa24.04■■□□□ 1.44
CDKN2A-201ENST00000304494 OR4K17Q8NGC6 315 aa24.04■■□□□ 1.44
CDKN2A-201ENST00000304494 NPDC1Q9NQX5 325 aaPredicted RBP24.04■■□□□ 1.44
CDKN2A-201ENST00000304494 RAP2CQ9Y3L5 183 aa24.04■■□□□ 1.44
CDKN2A-201ENST00000304494 A0A1W2PRB8 838 aa24.03■■□□□ 1.44
CDKN2A-201ENST00000304494 ERLIN1O75477 346 aa24.03■■□□□ 1.44
CDKN2A-201ENST00000304494 NKX2-2O95096 273 aa24.03■■□□□ 1.44
CDKN2A-201ENST00000304494 CPN1P15169 458 aa24.03■■□□□ 1.44
CDKN2A-201ENST00000304494 PRPS1L1P21108 318 aa24.03■■□□□ 1.44
CDKN2A-201ENST00000304494 MAP3K8P41279 467 aa24.03■■□□□ 1.44
CDKN2A-201ENST00000304494 RFX3P48380 749 aa24.03■■□□□ 1.44
CDKN2A-201ENST00000304494 RCAN2Q14206 197 aa24.03■■□□□ 1.44
CDKN2A-201ENST00000304494 SMU1Q2TAY7 513 aa24.03■■□□□ 1.44
CDKN2A-201ENST00000304494 CPTPQ5TA50 214 aa24.03■■□□□ 1.44
CDKN2A-201ENST00000304494 ZCCHC12Q6PEW1 402 aa24.03■■□□□ 1.44
CDKN2A-201ENST00000304494 ZNF781Q8N8C0 355 aa24.03■■□□□ 1.44
CDKN2A-201ENST00000304494 GIMAP1-GIMAP5A0A087WTJ2 511 aa24.02■■□□□ 1.44
CDKN2A-201ENST00000304494 CD8B2A6NJW9 211 aa24.02■■□□□ 1.44
CDKN2A-201ENST00000304494 IL2RAP01589 272 aa24.02■■□□□ 1.44
CDKN2A-201ENST00000304494 IGFBP2P18065 325 aa24.02■■□□□ 1.44
CDKN2A-201ENST00000304494 DPP4P27487 766 aa24.02■■□□□ 1.44
CDKN2A-201ENST00000304494 SLC1A6P48664 564 aa24.02■■□□□ 1.44
CDKN2A-201ENST00000304494 GFRA1P56159 465 aa24.02■■□□□ 1.44
CDKN2A-201ENST00000304494 DSCR4P56555 118 aaPredicted RBP24.02■■□□□ 1.44
CDKN2A-201ENST00000304494 EMX2Q04743 252 aa24.02■■□□□ 1.44
CDKN2A-201ENST00000304494 PDCD2Q16342 344 aaPredicted RBP24.02■■□□□ 1.44
CDKN2A-201ENST00000304494 LIX1LQ8IVB5 337 aa24.02■■□□□ 1.44
CDKN2A-201ENST00000304494 ZNF295-AS1Q8N0V1 137 aa24.02■■□□□ 1.44
CDKN2A-201ENST00000304494 ZPLD1Q8TCW7 415 aa24.02■■□□□ 1.44
CDKN2A-201ENST00000304494 PIK3R3Q92569 461 aa24.02■■□□□ 1.44
CDKN2A-201ENST00000304494 SLC9A6Q92581 669 aa24.02■■□□□ 1.44
CDKN2A-201ENST00000304494 GIMAP5Q96F15 307 aa24.02■■□□□ 1.44
CDKN2A-201ENST00000304494 C14orf79Q96F83 325 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms