RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 CER1O95813 267 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 DBIP07108 87 aaKnown RBP11.17□□□□□ -0.62
TPM3-202ENST00000302206 CRHBPP24387 322 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 ELAVL4P26378 380 aaKnown RBP11.17□□□□□ -0.62
TPM3-202ENST00000302206 POLR2IP36954 125 aaKnown RBP11.17□□□□□ -0.62
TPM3-202ENST00000302206 SEPHS1P49903 392 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 ESRRGP62508 458 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 CSNK2BP67870 215 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 POU6F2P78424 691 aaPredicted RBP11.17□□□□□ -0.62
TPM3-202ENST00000302206 MAT1AQ00266 395 aaKnown RBP11.17□□□□□ -0.62
TPM3-202ENST00000302206 FUT7Q11130 342 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 CDK5R2Q13319 367 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 RAPSNQ13702 412 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 GANABQ14697 944 aaKnown RBP11.17□□□□□ -0.62
TPM3-202ENST00000302206 KCNAB1Q14722 419 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 ZNHIT3Q15649 155 aaPredicted RBP11.17□□□□□ -0.62
TPM3-202ENST00000302206 CSRP2Q16527 193 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 ZSWIM7Q19AV6 140 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 CTU2Q2VPK5 515 aaKnown RBP11.17□□□□□ -0.62
TPM3-202ENST00000302206 NADK2Q4G0N4 442 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 RNF220Q5VTB9 566 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 FOXB2Q5VYV0 432 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 ZNF773Q6PK81 442 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 CD300LDQ6UXZ3 194 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 COMTD1Q86VU5 262 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 RBM45Q8IUH3 476 aaKnown RBP11.17□□□□□ -0.62
TPM3-202ENST00000302206 LACC1Q8IV20 430 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 GPR135Q8IZ08 494 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 TOR1AIP2Q8NFQ8 470 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 OR7G1Q8NGA0 311 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 OR52R1Q8NGF1 315 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 OR52J3Q8NH60 311 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 NDC1Q9BTX1 674 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 FNDC11Q9BVV2 318 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 DGCR6LQ9BY27 220 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 LANCL2Q9NS86 450 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 TMEM9Q9P0T7 183 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 SLC6A14Q9UN76 642 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 ASPMQ8IZT6 3477 aa11.17□□□□□ -0.62
TPM3-202ENST00000302206 GOLGA4Q13439 2230 aaKnown RBP11.16□□□□□ -0.62
TPM3-202ENST00000302206 TRBV4-1A0A0J9YWV2 114 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 SH3PXD2BA1X283 911 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 SIGLEC6O43699 453 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 FCMRO60667 390 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 CPNE6O95741 557 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 FOLR1P15328 257 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 JUNBP17275 347 aaPredicted RBP11.16□□□□□ -0.62
TPM3-202ENST00000302206 ELK4P28324 431 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 IFNA8P32881 189 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 GGT2P36268 569 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 EEF1A1P68104 462 aaKnown RBP11.16□□□□□ -0.62
TPM3-202ENST00000302206 RPP38P78345 283 aaKnown RBP11.16□□□□□ -0.62
TPM3-202ENST00000302206 IL5RAQ01344 420 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 IL1RL1Q01638 556 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 ACY1Q03154 408 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 ZNF155Q12901 538 aaPredicted RBP11.16□□□□□ -0.62
TPM3-202ENST00000302206 EXOSC7Q15024 291 aaKnown RBP11.16□□□□□ -0.62
TPM3-202ENST00000302206 NPTX1Q15818 432 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 MEP1AQ16819 746 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 BROXQ5VW32 411 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 SLC23A3Q6PIS1 610 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 ISLR2Q6UXK2 745 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 DGAT2L6Q6ZPD8 337 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 QSOX2Q6ZRP7 698 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 OLIG3Q7RTU3 272 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 ARHGAP22Q7Z5H3 698 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 WDR53Q7Z5U6 358 aaPredicted RBP11.16□□□□□ -0.62
TPM3-202ENST00000302206 SATL1Q86VE3 508 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 VRK2Q86Y07 508 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 GATAD2AQ86YP4 633 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 SHISA5Q8N114 240 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 DEPDC4Q8N2C3 294 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 AQP11Q8NBQ7 271 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 SIMC1Q8NDZ2 872 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 OR4D9Q8NGE8 314 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 OR6T1Q8NGN1 323 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 GPR151Q8TDV0 419 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 OIT3Q8WWZ8 545 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 ZNF501Q96CX3 271 aaPredicted RBP11.16□□□□□ -0.62
TPM3-202ENST00000302206 DGCR14Q96DF8 476 aaKnown RBP11.16□□□□□ -0.62
TPM3-202ENST00000302206 VSTM2LQ96N03 204 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 WFDC6Q9BQY6 131 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 UCK2Q9BZX2 261 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 GAREM1Q9H706 876 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 FOLH1BQ9HBA9 442 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 RLIMQ9NVW2 624 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 SRPK3Q9UPE1 567 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 CHST2Q9Y4C5 530 aa11.16□□□□□ -0.62
TPM3-202ENST00000302206 TMEM184BQ9Y519 407 aaPredicted RBP11.16□□□□□ -0.62
TPM3-202ENST00000302206 HEMK1Q9Y5R4 338 aaPredicted RBP11.16□□□□□ -0.62
TPM3-202ENST00000302206 CEP295Q9C0D2 2601 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 IGKV3D-11A0A0A0MRZ8 115 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 A0A1B0GX78 115 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 GDF9O60383 454 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 BRINP1O60477 761 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 FMO6PO60774 539 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 OR5F1O95221 314 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 GASTP01350 101 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 CFIP05156 583 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 SYPP08247 313 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms