RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 SEC23BQ15437 767 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 ZNHIT3Q15649 155 aaPredicted RBP13.23□□□□□ -0.29
SDC2-201ENST00000302190 MINDY4Q4G0A6 757 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 LAIR2Q6ISS4 152 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 HMGB4Q8WW32 186 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 ASB15Q8WXK1 588 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 TMPRSS11EQ9UL52 423 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 ZC3H12DA2A288 527 aaKnown RBP13.22□□□□□ -0.29
SDC2-201ENST00000302190 SH3D21A4FU49 640 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 ELAVL4P26378 380 aaKnown RBP13.22□□□□□ -0.29
SDC2-201ENST00000302190 ACADLP28330 430 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 SLC7A9P82251 487 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 EIF2B5Q13144 721 aaKnown RBP13.22□□□□□ -0.29
SDC2-201ENST00000302190 BAK1Q16611 211 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 TCTN3Q6NUS6 607 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 METTL2BQ6P1Q9 378 aaKnown RBP13.22□□□□□ -0.29
SDC2-201ENST00000302190 RTL4Q6ZR62 310 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 TMEM150AQ86TG1 271 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 MEIOBQ8N635 442 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 NXPE3Q969Y0 559 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 OTUB2Q96DC9 234 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 RBM18Q96H35 190 aaKnown RBP13.22□□□□□ -0.29
SDC2-201ENST00000302190 ZNF354BQ96LW1 612 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 MTIF3Q9H2K0 278 aaKnown RBP13.22□□□□□ -0.29
SDC2-201ENST00000302190 MYNNQ9NPC7 610 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 C1GALT1Q9NS00 363 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 ANTXRLA6NF34 631 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 KCNK2O95069 426 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 NTN1O95631 604 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 GSTM3P21266 225 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 MMP11P24347 488 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 CTBP2P56545 445 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 INSL4Q14641 139 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 TATDN3Q17R31 274 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 FAM83HQ6ZRV2 1179 aaPredicted RBP13.22□□□□□ -0.29
SDC2-201ENST00000302190 ACOT4Q8N9L9 421 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 VN1R2Q8NFZ6 395 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 SPRYD4Q8WW59 207 aaPredicted RBP13.22□□□□□ -0.29
SDC2-201ENST00000302190 FRYLO94915 3013 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 CHURC1-FNTBB4DL54 471 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 I3L521 148 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 LDB3O75112 727 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 CTSLP07711 333 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 PCSK2P16519 638 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 DDX6P26196 483 aaKnown RBP eCLIP13.22□□□□□ -0.291e-9■■■■■ 28.1
SDC2-201ENST00000302190 LIM2P55344 173 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 DEFB110Q30KQ9 67 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 BICRALQ6AI39 1079 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 SERPINA12Q8IW75 414 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 CPXM2Q8N436 756 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 TOMM5Q8N4H5 51 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 OR56A3Q8NH54 315 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 APH1BQ8WW43 257 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 TSACCQ96A04 125 aaPredicted RBP13.22□□□□□ -0.29
SDC2-201ENST00000302190 SNX18Q96RF0 628 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 PCBD2Q9H0N5 130 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 C11orf54Q9H0W9 315 aaPredicted RBP13.22□□□□□ -0.29
SDC2-201ENST00000302190 FBXO8Q9NRD0 319 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 STARD5Q9NSY2 213 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 TXNL4BQ9NX01 149 aaKnown RBP13.22□□□□□ -0.29
SDC2-201ENST00000302190 SLC23A2Q9UGH3 650 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 INSL6Q9Y581 213 aa13.22□□□□□ -0.29
SDC2-201ENST00000302190 KNTC1P50748 2209 aa13.21□□□□□ -0.29
SDC2-201ENST00000302190 BLOC1S5-TXNDC5H3BN57 136 aa13.21□□□□□ -0.29
SDC2-201ENST00000302190 TMPRSS11DO60235 418 aa13.21□□□□□ -0.29
SDC2-201ENST00000302190 ZNF10P21506 573 aaPredicted RBP13.21□□□□□ -0.29
SDC2-201ENST00000302190 NDUFAF6Q330K2 333 aa13.21□□□□□ -0.29
SDC2-201ENST00000302190 C1orf53Q5VUE5 145 aa13.21□□□□□ -0.29
SDC2-201ENST00000302190 SLX4IPQ5VYV7 408 aa13.21□□□□□ -0.29
SDC2-201ENST00000302190 ARRDC3Q96B67 414 aa13.21□□□□□ -0.29
SDC2-201ENST00000302190 SPACA7Q96KW9 195 aa13.21□□□□□ -0.29
SDC2-201ENST00000302190 CAMK1GQ96NX5 476 aa13.21□□□□□ -0.29
SDC2-201ENST00000302190 KXD1Q9BQD3 176 aa13.21□□□□□ -0.29
SDC2-201ENST00000302190 BCL7BQ9BQE9 202 aa13.21□□□□□ -0.29
SDC2-201ENST00000302190 SPATA9Q9BWV2 254 aa13.21□□□□□ -0.29
SDC2-201ENST00000302190 C1QTNF7Q9BXJ2 289 aa13.21□□□□□ -0.29
SDC2-201ENST00000302190 A0A1W2PQU0 124 aa13.21□□□□□ -0.29
SDC2-201ENST00000302190 GTPBP1O00178 669 aaKnown RBP13.21□□□□□ -0.29
SDC2-201ENST00000302190 IL32P24001 234 aa13.21□□□□□ -0.29
SDC2-201ENST00000302190 CDK10Q15131 360 aa13.21□□□□□ -0.29
SDC2-201ENST00000302190 HENMT1Q5T8I9 393 aaKnown RBP13.21□□□□□ -0.29
SDC2-201ENST00000302190 SFRP4Q6FHJ7 346 aaPredicted RBP13.21□□□□□ -0.29
SDC2-201ENST00000302190 FAHD1Q6P587 224 aa13.21□□□□□ -0.29
SDC2-201ENST00000302190 OR2T33Q8NG76 320 aa13.21□□□□□ -0.29
SDC2-201ENST00000302190 OR52E4Q8NGH9 312 aa13.21□□□□□ -0.29
SDC2-201ENST00000302190 AIFM2Q9BRQ8 373 aa13.21□□□□□ -0.29
SDC2-201ENST00000302190 BTBD1Q9H0C5 482 aa13.21□□□□□ -0.29
SDC2-201ENST00000302190 GNG8Q9UK08 70 aa13.21□□□□□ -0.29
SDC2-201ENST00000302190 POLHQ9Y253 713 aa13.21□□□□□ -0.29
SDC2-201ENST00000302190 MAU2Q9Y6X3 613 aa13.21□□□□□ -0.29
SDC2-201ENST00000302190 OR6A2O95222 327 aa13.21□□□□□ -0.3
SDC2-201ENST00000302190 APODP05090 189 aa13.21□□□□□ -0.3
SDC2-201ENST00000302190 CD3GP09693 182 aa13.21□□□□□ -0.3
SDC2-201ENST00000302190 ETV5P41161 510 aa13.21□□□□□ -0.3
SDC2-201ENST00000302190 XCR1P46094 333 aa13.21□□□□□ -0.3
SDC2-201ENST00000302190 OR3A3P47888 321 aa13.21□□□□□ -0.3
SDC2-201ENST00000302190 ETV1P50549 477 aa13.21□□□□□ -0.3
SDC2-201ENST00000302190 C1orf61Q13536 156 aa13.21□□□□□ -0.3
SDC2-201ENST00000302190 LYPD8Q6UX82 237 aa13.21□□□□□ -0.3
SDC2-201ENST00000302190 ADIPOR2Q86V24 386 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms