RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 GRK5P34947 590 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 ZXDBP98169 803 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 TAP2Q03519 686 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 SNIP1Q8TAD8 396 aaKnown RBP16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 ZFPM2Q8WW38 1151 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 CNN2Q99439 309 aaKnown RBP16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 RIMS3Q9UJD0 308 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 CBLCQ9ULV8 474 aa16.7■□□□□ 0.26
CDC42EP3-201ENST00000295324 SLITRK5O94991 958 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 CSN2P05814 226 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 NPRL3Q12980 569 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 VTCN1Q7Z7D3 282 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 ZNF611Q8N823 705 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 ACSS1Q9NUB1 689 aaPredicted RBP16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 CLEC4EQ9ULY5 219 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 DHDHQ9UQ10 334 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 GABRR3A8MPY1 467 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 PRRT4C9JH25 899 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 TEX46H3BTG2 121 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 RUNDC3AQ59EK9 446 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 SPIN3Q5JUX0 258 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 OR8H1Q8NGG4 311 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 KCNK5O95279 499 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 RETP07949 1114 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 PCGF2P35227 344 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 CCR5P51681 352 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 CWF19L1Q69YN2 538 aaKnown RBP16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 SUN5Q8TC36 379 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 TMEM185BQ9H7F4 350 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 METTL4Q8N3J2 472 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 ACBD7Q8N6N7 88 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 FANCGO15287 622 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 RASAL1O95294 804 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 POU3F2P20265 443 aaPredicted RBP16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 CDH15P55291 814 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 TGFBR3Q03167 851 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 GARNL3Q5VVW2 1013 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 CCSAPQ6IQ19 270 aaPredicted RBP16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 ZNF773Q6PK81 442 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 FOXQ1Q9C009 403 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 UBQLN4Q9NRR5 601 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 PTTG2Q9NZH5 202 aa16.69■□□□□ 0.26
CDC42EP3-201ENST00000295324 H0YIV9 168 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 GGTA1PQ4G0N0 100 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 CPZQ66K79 652 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 LEG1Q6P5S2 330 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 FAM46AQ96IP4 442 aaKnown RBP16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 BTBD2Q9BX70 525 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 RNF6Q9Y252 685 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 DPPA5A6NC42 116 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 A6NIZ1 184 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 GALR3O60755 368 aaPredicted RBP16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 SLC2A2P11168 524 aaPredicted RBP16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 ABOP16442 354 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 SLC5A2P31639 672 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 RAP1BP61224 184 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 RAP1AP62834 184 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 SELENOWP63302 87 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 EXOSC7Q15024 291 aaKnown RBP16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 SLC18B1Q6NT16 456 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 ABHD12BQ7Z5M8 362 aaPredicted RBP16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 OR4K13Q8NH42 304 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 FEVQ99581 238 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 CDC6Q99741 560 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 RBM24Q9BX46 236 aaKnown RBP16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 MAP1BP46821 2468 aaKnown RBP16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 C2CD4DB7Z1M9 353 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 PTPRRQ15256 657 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 ZNF829Q3KNS6 432 aaPredicted RBP16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 TOMM5Q8N4H5 51 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 OR8K3Q8NH51 312 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 LRR1Q96L50 414 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 C12orf4Q9NQ89 552 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 MGAT4AQ9UM21 535 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 LINC01565O15544 149 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 PYCR1P32322 319 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 RPS26P11Q5JNZ5 115 aaPredicted RBP16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 C6orf89Q6UWU4 347 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 ZNF782Q6ZMW2 699 aaPredicted RBP16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 DGLUCYQ7Z3D6 616 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 PDSS2Q86YH6 399 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 OR1E3Q8WZA6 343 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 MUS81Q96NY9 551 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 LMF2Q9BU23 707 aaKnown RBP16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 TAS2R10Q9NYW0 307 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 ATXN7L1Q9ULK2 861 aaPredicted RBP16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 USP54Q70EL1 1684 aa16.68■□□□□ 0.26
CDC42EP3-201ENST00000295324 IFNA21P01568 189 aa16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 CTGFP29279 349 aa16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 CDS1Q92903 461 aa16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 MSLNLQ96KJ4 702 aa16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 hCG_1807616A0A1W2PRN6 198 aa16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 GGT3PA6NGU5 568 aa16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 DAP3P51398 398 aaKnown RBP16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 ALG10Q5BKT4 473 aa16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 C1orf53Q5VUE5 145 aa16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 SPRYD4Q8WW59 207 aaPredicted RBP16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 UBXN10Q96LJ8 280 aa16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 FGF22Q9HCT0 170 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms