RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 VEGFBP49765 207 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 MALLQ13021 153 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 SPRED3Q2MJR0 410 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 FAM83HQ6ZRV2 1179 aaPredicted RBP12.09□□□□□ -0.47
PTCD1-201ENST00000292478 RABEPKQ7Z6M1 372 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 GALNT10Q86SR1 603 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 CHDHQ8NE62 594 aaPredicted RBP12.09□□□□□ -0.47
PTCD1-201ENST00000292478 ABHD11Q8NFV4 315 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 OR9Q2Q8NGE9 314 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 OR52E1Q8NGJ3 308 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 OR9A2Q8NGT5 310 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 OR5AK2Q8NH90 309 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 OR1F2PQ96R84 312 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 MYADMQ96S97 322 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 GJD2Q9UKL4 321 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 NWD2Q9ULI1 1742 aa12.08□□□□□ -0.47
PTCD1-201ENST00000292478 CREBL2O60519 120 aaPredicted RBP12.08□□□□□ -0.47
PTCD1-201ENST00000292478 C1SP09871 688 aa12.08□□□□□ -0.47
PTCD1-201ENST00000292478 CCNOP22674 350 aa12.08□□□□□ -0.47
PTCD1-201ENST00000292478 HOXD9P28356 352 aaPredicted RBP12.08□□□□□ -0.47
PTCD1-201ENST00000292478 P2RY2P41231 377 aa12.08□□□□□ -0.47
PTCD1-201ENST00000292478 ZNF81P51508 661 aa12.08□□□□□ -0.47
PTCD1-201ENST00000292478 BCL2L15Q5TBC7 163 aa12.08□□□□□ -0.47
PTCD1-201ENST00000292478 C1orf94Q6P1W5 598 aa12.08□□□□□ -0.47
PTCD1-201ENST00000292478 C3P1Q6ZMU1 363 aa12.08□□□□□ -0.47
PTCD1-201ENST00000292478 LRRC69Q6ZNQ3 347 aa12.08□□□□□ -0.47
PTCD1-201ENST00000292478 HMGN2P46Q86SG4 172 aa12.08□□□□□ -0.47
PTCD1-201ENST00000292478 SLC35F2Q8IXU6 374 aa12.08□□□□□ -0.47
PTCD1-201ENST00000292478 SYT14Q8NB59 555 aa12.08□□□□□ -0.47
PTCD1-201ENST00000292478 ADAMTS19Q8TE59 1207 aa12.08□□□□□ -0.47
PTCD1-201ENST00000292478 TMEM239Q8WW34 195 aa12.08□□□□□ -0.47
PTCD1-201ENST00000292478 GTF2H4Q92759 462 aa12.08□□□□□ -0.47
PTCD1-201ENST00000292478 KLHL9Q9P2J3 617 aa12.08□□□□□ -0.47
PTCD1-201ENST00000292478 H3BMQ9 156 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 VWA5B2Q8N398 1253 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 SYNPOQ8N3V7 929 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 SLC7A13Q8TCU3 470 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 ZNF480Q8WV37 535 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 ISL2Q96A47 359 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 KLHL15Q96M94 604 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 COG8Q96MW5 612 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 ZNF700Q9H0M5 742 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 PCDHGA3Q9Y5H0 932 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 LOC100509620A0A075B734 347 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 H7C417 338 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 E2F3O00716 465 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 PTGS2P35354 604 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 RGRP47804 291 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 RPS15P62841 145 aaKnown RBP12.08□□□□□ -0.48
PTCD1-201ENST00000292478 ZXDBP98169 803 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 BORCS8Q96FH0 119 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.08□□□□□ -0.48
PTCD1-201ENST00000292478 ENY2Q9NPA8 101 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 H0YIV9 168 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 H3BSH0 61 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 M0R3H8 397 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 VNN2O95498 520 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 P04436 131 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 CDK1P06493 297 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 DNASE1P24855 282 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 CTSCP53634 463 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 PER3P56645 1201 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 TRIM73Q86UV7 250 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 MTG2Q9H4K7 406 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 ZBTB20Q9HC78 741 aaPredicted RBP12.08□□□□□ -0.48
PTCD1-201ENST00000292478 HCFC1R1Q9NWW0 138 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 TMPRSS11EQ9UL52 423 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 SPEF1Q9Y4P9 236 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 NAP1L6A6NFF2 107 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 FTCDNL1E5RQL4 147 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 OR2T1O43869 369 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 BCAS1O75363 584 aaPredicted RBP12.08□□□□□ -0.48
PTCD1-201ENST00000292478 ATF4P18848 351 aaPredicted RBP12.08□□□□□ -0.48
PTCD1-201ENST00000292478 BMXP51813 675 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 FXYD6P3P58550 94 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 PIN1Q13526 163 aaPredicted RBP12.08□□□□□ -0.48
PTCD1-201ENST00000292478 ZNF691Q5VV52 312 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 RAET1LQ5VY80 246 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 SSX6Q7RTT6 188 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 FOXRED2Q8IWF2 684 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 UEVLDQ8IX04 471 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 SPARTQ8N0X7 666 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 METTL4Q8N3J2 472 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 ACOT11Q8WXI4 607 aaPredicted RBP12.08□□□□□ -0.48
PTCD1-201ENST00000292478 CCDC120Q96HB5 630 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 MAELQ96JY0 434 aaKnown RBP12.08□□□□□ -0.48
PTCD1-201ENST00000292478 ALG8Q9BVK2 526 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 OR10A4Q9H209 315 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 NUP50Q9UKX7 468 aa12.08□□□□□ -0.48
PTCD1-201ENST00000292478 ANKRD28O15084 1053 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 SORBS2O94875 1100 aaKnown RBP12.07□□□□□ -0.48
PTCD1-201ENST00000292478 PPP1R3DO95685 299 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 FAM189BP81408 668 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 CDK10Q15131 360 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 GPR137CQ8N3F9 429 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 LMF2Q9BU23 707 aaKnown RBP12.07□□□□□ -0.48
PTCD1-201ENST00000292478 SLC6A16Q9GZN6 736 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 GSKIPQ9P0R6 139 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 SRPK3Q9UPE1 567 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 PLCH1Q4KWH8 1693 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms