RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 LIPAP38571 399 aa15.71■□□□□ 0.11
CPSF4-201ENST00000292476 IDH2P48735 452 aaKnown RBP15.71■□□□□ 0.11
CPSF4-201ENST00000292476 CCT3P49368 545 aaKnown RBP15.71■□□□□ 0.11
CPSF4-201ENST00000292476 DUSP3P51452 185 aaPredicted RBP15.71■□□□□ 0.11
CPSF4-201ENST00000292476 GFERP55789 205 aa15.71■□□□□ 0.11
CPSF4-201ENST00000292476 HSPB3Q12988 150 aa15.71■□□□□ 0.11
CPSF4-201ENST00000292476 RUNX2Q13950 521 aa15.71■□□□□ 0.11
CPSF4-201ENST00000292476 GRM7Q14831 915 aa15.71■□□□□ 0.11
CPSF4-201ENST00000292476 INAQ16352 499 aa15.71■□□□□ 0.11
CPSF4-201ENST00000292476 CLPPQ16740 277 aaPredicted RBP15.71■□□□□ 0.11
CPSF4-201ENST00000292476 FAM214AQ32MH5 1076 aa15.71■□□□□ 0.11
CPSF4-201ENST00000292476 C18orf63Q68DL7 685 aa15.71■□□□□ 0.11
CPSF4-201ENST00000292476 TAGAPQ8N103 731 aa15.71■□□□□ 0.11
CPSF4-201ENST00000292476 STX19Q8N4C7 294 aa15.71■□□□□ 0.11
CPSF4-201ENST00000292476 OR52J3Q8NH60 311 aa15.71■□□□□ 0.11
CPSF4-201ENST00000292476 ZNF675Q8TD23 568 aa15.71■□□□□ 0.11
CPSF4-201ENST00000292476 NXF2Q9GZY0 626 aaKnown RBP15.71■□□□□ 0.11
CPSF4-201ENST00000292476 RACGAP1Q9H0H5 632 aa15.71■□□□□ 0.11
CPSF4-201ENST00000292476 DCSTAMPQ9H295 470 aa15.71■□□□□ 0.11
CPSF4-201ENST00000292476 GLIPR2Q9H4G4 154 aa15.71■□□□□ 0.11
CPSF4-201ENST00000292476 C3orf14Q9HBI5 128 aa15.71■□□□□ 0.11
CPSF4-201ENST00000292476 IRAK4Q9NWZ3 460 aa15.71■□□□□ 0.11
CPSF4-201ENST00000292476 DAPK2Q9UIK4 370 aa15.71■□□□□ 0.11
CPSF4-201ENST00000292476 MGAT4BQ9UQ53 548 aa15.71■□□□□ 0.11
CPSF4-201ENST00000292476 IGHV5-51A0A0C4DH38 117 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 TMEM247A6NEH6 219 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 SAGE2PA6NJ88 616 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 SLC30A4O14863 429 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 ADORA3P0DMS8 318 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 CD1CP29017 333 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 AVPR1BP47901 424 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 LIMK1P53667 647 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 CRISP1P54107 249 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 PRR5P85299 388 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.7■□□□□ 0.1
CPSF4-201ENST00000292476 AMZ1Q400G9 498 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 NKAIN2Q5VXU1 208 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 Q6ZPB1 254 aaPredicted RBP15.7■□□□□ 0.1
CPSF4-201ENST00000292476 GATAD2AQ86YP4 633 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 LACC1Q8IV20 430 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 AMER2Q8N7J2 671 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 AQP11Q8NBQ7 271 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 OR9Q2Q8NGE9 314 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 PROX1Q92786 737 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 CCDC74AQ96AQ1 378 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 ZNF607Q96SK3 696 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 DSN1Q9H410 356 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 SLAMF7Q9NQ25 335 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 CLN6Q9NWW5 311 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 DLL3Q9NYJ7 618 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 C5AR2Q9P296 337 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 CLCA2Q9UQC9 943 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 MRPS33Q9Y291 106 aaKnown RBP15.7■□□□□ 0.1
CPSF4-201ENST00000292476 HYKKA2RU49 373 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 DCDC2BA2VCK2 349 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 ISPDA4D126 451 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 FITM1A5D6W6 292 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 METTL15A6NJ78 407 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 GLOD5A6NK44 160 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 FAAHO00519 579 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 PCDH17O14917 1159 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 CNOT3O75175 753 aaKnown RBP15.7■□□□□ 0.1
CPSF4-201ENST00000292476 MFN2O95140 757 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 GABRA4P48169 554 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 PPP5CP53041 499 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 CASP9P55211 416 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 RAB38P57729 211 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 SNRPGP62308 76 aaKnown RBP15.7■□□□□ 0.1
CPSF4-201ENST00000292476 LSM3P62310 102 aaKnown RBP15.7■□□□□ 0.1
CPSF4-201ENST00000292476 PTGES3Q15185 160 aaKnown RBP15.7■□□□□ 0.1
CPSF4-201ENST00000292476 DEFB110Q30KQ9 67 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 INAVAQ3KP66 663 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 TIMM50Q3ZCQ8 353 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 ZNF404Q494X3 552 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 LRRC25Q8N386 305 aaPredicted RBP15.7■□□□□ 0.1
CPSF4-201ENST00000292476 HORMAD2Q8N7B1 307 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 Q8N9G6 341 aaPredicted RBP15.7■□□□□ 0.1
CPSF4-201ENST00000292476 C7orf57Q8NEG2 295 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 OR56A1Q8NGH5 318 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 MCFD2Q8NI22 146 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 SLC38A5Q8WUX1 472 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 CNRIP1Q96F85 164 aaPredicted RBP15.7■□□□□ 0.1
CPSF4-201ENST00000292476 FAM210AQ96ND0 272 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 NMNAT1Q9HAN9 279 aaPredicted RBP15.7■□□□□ 0.1
CPSF4-201ENST00000292476 SIRT3Q9NTG7 399 aaPredicted RBP15.7■□□□□ 0.1
CPSF4-201ENST00000292476 CHCHD3Q9NX63 227 aaKnown RBP15.7■□□□□ 0.1
CPSF4-201ENST00000292476 ACAD8Q9UKU7 415 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 TMCC3Q9ULS5 477 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 PCDHGA3Q9Y5H0 932 aa15.7■□□□□ 0.1
CPSF4-201ENST00000292476 ASCC3Q8N3C0 2202 aaKnown RBP15.69■□□□□ 0.1
CPSF4-201ENST00000292476 J3KTA2 159 aa15.69■□□□□ 0.1
CPSF4-201ENST00000292476 SIGLEC6O43699 453 aa15.69■□□□□ 0.1
CPSF4-201ENST00000292476 NSA2O95478 260 aaKnown RBP15.69■□□□□ 0.1
CPSF4-201ENST00000292476 FHP07954 510 aa15.69■□□□□ 0.1
CPSF4-201ENST00000292476 SDHBP21912 280 aa15.69■□□□□ 0.1
CPSF4-201ENST00000292476 C21orf33P30042 268 aaPredicted RBP15.69■□□□□ 0.1
CPSF4-201ENST00000292476 ST3GAL4Q11206 333 aa15.69■□□□□ 0.1
CPSF4-201ENST00000292476 PUM1Q14671 1186 aaKnown RBP eCLIP15.69■□□□□ 0.1
CPSF4-201ENST00000292476 TMEM201Q5SNT2 666 aa15.69■□□□□ 0.1
CPSF4-201ENST00000292476 YOD1Q5VVQ6 348 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms