RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 ADAP00813 363 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 PIGRP01833 764 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 RAB4AP20338 218 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 THBS2P35442 1172 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 RPS5P46782 204 aaKnown RBP10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 TMEM115Q12893 351 aaPredicted RBP10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 ECH1Q13011 328 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 MS4A13Q5J8X5 152 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 PHF19Q5T6S3 580 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 CARD17Q5XLA6 110 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 C22orf39Q6P5X5 142 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 MAMDC4Q6UXC1 1216 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 RHEBL1Q8TAI7 183 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 DDX1Q92499 740 aaKnown RBP10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 TTC9Q92623 222 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 TOMM40LQ969M1 308 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 CHFRQ96EP1 664 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 VRK1Q99986 396 aaPredicted RBP10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 G6PC3Q9BUM1 346 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 FBXL12Q9NXK8 326 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 ZNF223Q9UK11 482 aaPredicted RBP10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 GPR52Q9Y2T5 361 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 PEX12O00623 359 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 CD9P21926 228 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 MSX1P28360 303 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 DDOSTP39656 456 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 MC2RQ01718 297 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 UBXN2BQ14CS0 331 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 KIAA1211LQ6NV74 962 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 RCBTB1Q8NDN9 531 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 ANKK1Q8NFD2 765 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 FRS2Q8WU20 508 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 FCRL3Q96P31 734 aaPredicted RBP10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 PEBP4Q96S96 227 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 OR51J1Q9H342 316 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 RDH14Q9HBH5 336 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 GPATCH2Q9NW75 528 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 ATG4BQ9Y4P1 393 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 RPS17P08708 135 aaKnown RBP10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 CSNK2A1P68400 391 aaPredicted RBP10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 FAM189BP81408 668 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 TMPPEQ6ZT21 453 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 CTU1Q7Z7A3 348 aaKnown RBP10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 CSNK2A3Q8NEV1 391 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 OR4K13Q8NH42 304 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 NDNFQ8TB73 568 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 LRRC15Q8TF66 581 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 MYLIPQ8WY64 445 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 RBM38Q9H0Z9 239 aaKnown RBP10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 RNF39Q9H2S5 420 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 MEPEQ9NQ76 525 aaPredicted RBP10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 PRTFDC1Q9NRG1 225 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 C19orf25Q9UFG5 118 aaPredicted RBP10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 SCML2Q9UQR0 700 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 RNF215Q9Y6U7 377 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 CDC123O75794 336 aaPredicted RBP10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 RAB3DO95716 219 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 CFIP05156 583 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 ADH5P11766 374 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 HSD17B1P14061 328 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 GNSP15586 552 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 RAB6AP20340 208 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 MRPL49Q13405 166 aaKnown RBP10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 DPY19L2P1Q6NXN4 242 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 C17orf99Q6UX52 265 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 DCAF4L2Q8NA75 395 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 AVL9Q8NBF6 648 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 TSTD1Q8NFU3 115 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 METTL2AQ96IZ6 378 aaKnown RBP10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 PTCHD1Q96NR3 888 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 PITX2Q99697 317 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 ZNF436Q9C0F3 470 aaPredicted RBP10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 GPR88Q9GZN0 384 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 DNTTIP1Q9H147 329 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 GLTPQ9NZD2 209 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 TMPRSS11EQ9UL52 423 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 ANHXE9PGG2 379 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 MRPS14O60783 128 aaKnown RBP10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 SLC35E2BP0CK96 405 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 LCN10Q6JVE6 187 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 C3P1Q6ZMU1 363 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 WDSUB1Q8N9V3 476 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 OR5D16Q8NGK9 328 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 GTF2H4Q92759 462 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 MMABQ96EY8 250 aaPredicted RBP10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 ZNF419Q96HQ0 510 aaPredicted RBP10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 SLX1AQ9BQ83 275 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 KCNK12Q9HB15 430 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 GCM1Q9NP62 436 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 EDDM13A0A1B0GTR0 161 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 TRAPPC13A5PLN9 417 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 ARPC1BO15143 372 aaKnown RBP10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 PDGFAP04085 211 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 FBXO45P0C2W1 286 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 ETFAP13804 333 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 GGT1P19440 569 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 SOX3P41225 446 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 NKX3-2P78367 333 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 TLE3Q04726 772 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 PAPD5Q8NDF8 572 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms