RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 GPAT4Q86UL3 456 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 CFAP206Q8IYR0 622 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 SYT14Q8NB59 555 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 VN1R2Q8NFZ6 395 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 RAD51AP1Q96B01 352 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 CHFRQ96EP1 664 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 TOE1Q96GM8 510 aaKnown RBP9.75□□□□□ -0.85
SKA1-201ENST00000285116 ATF6BQ99941 703 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 ARHGAP9Q9BRR9 750 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 WACQ9BTA9 647 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 CLEC4MQ9H2X3 399 aaPredicted RBP9.75□□□□□ -0.85
SKA1-201ENST00000285116 SERHL2Q9H4I8 314 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 SLC9A8Q9Y2E8 581 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 YARS2Q9Y2Z4 477 aaKnown RBP9.75□□□□□ -0.85
SKA1-201ENST00000285116 DNMT3AQ9Y6K1 912 aaPredicted RBP9.75□□□□□ -0.85
SKA1-201ENST00000285116 STON1Q9Y6Q2 735 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 NCOR1O75376 2440 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 H3BN98 237 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 SYT5O00445 386 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 LZTS3O60299 673 aaPredicted RBP9.75□□□□□ -0.85
SKA1-201ENST00000285116 CHRM5P08912 532 aaPredicted RBP9.75□□□□□ -0.85
SKA1-201ENST00000285116 ANXA3P12429 323 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 MMP11P24347 488 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 ANXA11P50995 505 aaKnown RBP9.75□□□□□ -0.85
SKA1-201ENST00000285116 DSG2Q14126 1118 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 PARS2Q7L3T8 475 aaKnown RBP9.75□□□□□ -0.85
SKA1-201ENST00000285116 ZER1Q7Z7L7 766 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 ZNF547Q8IVP9 402 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 DCUN1D3Q8IWE4 304 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 POGLUT1Q8NBL1 392 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 WFIKKN2Q8TEU8 576 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 UFD1Q92890 307 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 CAMK1GQ96NX5 476 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 TM9SF2Q99805 663 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 AIF1LQ9BQI0 150 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 PRR14Q9BWN1 585 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 DDX31Q9H8H2 851 aaKnown RBP9.75□□□□□ -0.85
SKA1-201ENST00000285116 LHX9Q9NQ69 397 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 MED17Q9NVC6 651 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 SEC14L3Q9UDX4 400 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 UBQLN2Q9UHD9 624 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 FKBP7Q9Y680 259 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 RNF215Q9Y6U7 377 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 C7orf66A4D0T2 115 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 TSPAN4O14817 238 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 SLC19A2O60779 497 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 SOX14O95416 240 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 IGFBP1P08833 259 aaPredicted RBP9.74□□□□□ -0.85
SKA1-201ENST00000285116 HOXD4P09016 255 aaPredicted RBP9.74□□□□□ -0.85
SKA1-201ENST00000285116 WEE1P30291 646 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 KHKP50053 298 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 CAV3P56539 151 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 RAB14P61106 215 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 FOXD4Q12950 439 aaPredicted RBP9.74□□□□□ -0.85
SKA1-201ENST00000285116 GINS1Q14691 196 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 ZNF77Q15935 545 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 SNAPC1Q16533 368 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 IER5LQ5T953 404 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 TNFAIP8L2Q6P589 184 aaPredicted RBP9.74□□□□□ -0.85
SKA1-201ENST00000285116 NUDT13Q86X67 352 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 MMP21Q8N119 569 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 ARIH2OSQ8N7S6 290 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 MOAP1Q96BY2 351 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 ZSWIM3Q96MP5 696 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 PINK1Q9BXM7 581 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 SMG9Q9H0W8 520 aaKnown RBP9.74□□□□□ -0.85
SKA1-201ENST00000285116 C11orf49Q9H6J7 331 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 KLF15Q9UIH9 416 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 ZNF222Q9UK12 451 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 FBXW2Q9UKT8 454 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 CCL26Q9Y258 94 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 PRAMEF27A3QJZ7 478 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 ANKDD1BA6NHY2 528 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 CLTBP09497 229 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 PPP2R1BP30154 601 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 IFNGR2P38484 337 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 CLCNKAP51800 687 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 BDH1Q02338 343 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 HSF2Q03933 536 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 EXOSC2Q13868 293 aaKnown RBP9.74□□□□□ -0.85
SKA1-201ENST00000285116 PLA1AQ53H76 456 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 NDUFAF5Q5TEU4 345 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 DEF8Q6ZN54 512 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 BCDIN3DQ7Z5W3 292 aaKnown RBP9.74□□□□□ -0.85
SKA1-201ENST00000285116 C11orf96Q7Z7L8 435 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 ZNF655Q8N720 491 aaPredicted RBP9.74□□□□□ -0.85
SKA1-201ENST00000285116 ZNF740Q8NDX6 193 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 OR4K5Q8NGD3 323 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 GNPDA2Q8TDQ7 276 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 PMEPA1Q969W9 287 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 SCMH1Q96GD3 660 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 LRR1Q96L50 414 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 UBL7Q96S82 380 aaPredicted RBP9.74□□□□□ -0.85
SKA1-201ENST00000285116 FNDC11Q9BVV2 318 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 MVB12BQ9H7P6 319 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 ZC4H2Q9NQZ6 224 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 ASB6Q9NWX5 421 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 TVP23BQ9NYZ1 205 aa9.74□□□□□ -0.85
SKA1-201ENST00000285116 EXOGQ9Y2C4 368 aaKnown RBP9.74□□□□□ -0.85
SKA1-201ENST00000285116 A0A0G2JPF8 293 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms