RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 ZNF441Q8N8Z8 693 aa17.5■□□□□ 0.39
PDLIM3-202ENST00000284770 NUBPLQ8TB37 319 aa17.5■□□□□ 0.39
PDLIM3-202ENST00000284770 M1APQ8TC57 530 aa17.5■□□□□ 0.39
PDLIM3-202ENST00000284770 ELP5Q8TE02 316 aa17.5■□□□□ 0.39
PDLIM3-202ENST00000284770 RMND5BQ96G75 393 aaPredicted RBP17.5■□□□□ 0.39
PDLIM3-202ENST00000284770 RNF145Q96MT1 663 aa17.5■□□□□ 0.39
PDLIM3-202ENST00000284770 NXF5Q9H1B4 397 aaKnown RBP17.5■□□□□ 0.39
PDLIM3-202ENST00000284770 SLC38A1Q9H2H9 487 aa17.5■□□□□ 0.39
PDLIM3-202ENST00000284770 CBLCQ9ULV8 474 aa17.5■□□□□ 0.39
PDLIM3-202ENST00000284770 SAMD4AQ9UPU9 718 aaKnown RBP17.5■□□□□ 0.39
PDLIM3-202ENST00000284770 OR10H1Q9Y4A9 318 aa17.5■□□□□ 0.39
PDLIM3-202ENST00000284770 TMEM229AB2RXF0 380 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 PRKNO60260 465 aaPredicted RBP17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 FCMRO60667 390 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 STX11O75558 287 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 PDE9AO76083 593 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 IFNA14P01570 189 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 LIFP15018 202 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 ETS2P15036 469 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 PLA2G5P39877 138 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 VHLP40337 213 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 CHRNEQ04844 493 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 ELOAQ14241 798 aaKnown RBP17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 NNATQ16517 81 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 CYP27C1Q4G0S4 372 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 FAM98BQ52LJ0 330 aaKnown RBP17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 AP1ARQ63HQ0 302 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 EIF3MQ7L2H7 374 aaKnown RBP17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 OLIG3Q7RTU3 272 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 MRGPREQ86SM8 312 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 OR5L2Q8NGL0 311 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 ADAMTS17Q8TE56 1095 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 TP53INP1Q96A56 240 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 PYURFQ96I23 114 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 ZNF607Q96SK3 696 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 CHID1Q9BWS9 393 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 ZNF350Q9GZX5 532 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 MAGIXQ9H6Y5 334 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 MMP25Q9NPA2 562 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 AGPAT4Q9NRZ5 378 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 P4HTMQ9NXG6 502 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 RPS6KA6Q9UK32 745 aa17.49■□□□□ 0.39
PDLIM3-202ENST00000284770 ZFAND5O76080 213 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 ZIC2O95409 532 aaPredicted RBP17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 HPP00738 406 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 CAPNS1P04632 268 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 GUSBP08236 651 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 ICAM2P13598 275 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 CHRNB3Q05901 458 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 TYW3Q6IPR3 259 aaKnown RBP17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 FIGNL1Q6PIW4 674 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 FRRS1Q6ZNA5 592 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 KRT73Q86Y46 540 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 OR10Q1Q8NGQ4 319 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 TAMM41Q96BW9 452 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 SLC47A1Q96FL8 570 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 SAP130Q9H0E3 1048 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 MTHFD2LQ9H903 347 aaPredicted RBP17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 ZNF160Q9HCG1 818 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 POLE3Q9NRF9 147 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 FBXL4Q9UKA2 621 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 WDR45Q9Y484 360 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 GPC6Q9Y625 555 aaPredicted RBP17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 PIEZO1Q92508 2521 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 DSPPQ9NZW4 1301 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 NINQ8N4C6 2090 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 TO15178 435 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 ACOX3O15254 700 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 TPST1O60507 370 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 SERPINB7O75635 380 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 ZNF682O95780 498 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 PEX2P28328 305 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 NR0B1P51843 470 aaKnown RBP17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 TRIP10Q15642 601 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 CYBRD1Q53TN4 286 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 OGFRL1Q5TC84 451 aaPredicted RBP17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 LPCAT4Q643R3 524 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 BCORP1Q8N888 145 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 HSPBAP1Q96EW2 488 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 IP6K3Q96PC2 410 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 G6PC3Q9BUM1 346 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 FBXO34Q9NWN3 711 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 ADPRHL2Q9NX46 363 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 MKLN1Q9UL63 735 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 MSRB2Q9Y3D2 182 aa17.48■□□□□ 0.39
PDLIM3-202ENST00000284770 PEX12O00623 359 aa17.47■□□□□ 0.39
PDLIM3-202ENST00000284770 MFN2O95140 757 aa17.47■□□□□ 0.39
PDLIM3-202ENST00000284770 IGKV1D-16P01601 117 aa17.47■□□□□ 0.39
PDLIM3-202ENST00000284770 MT-ND1P03886 318 aa17.47■□□□□ 0.39
PDLIM3-202ENST00000284770 OPN1SWP03999 348 aa17.47■□□□□ 0.39
PDLIM3-202ENST00000284770 SEMG1P04279 462 aa17.47■□□□□ 0.39
PDLIM3-202ENST00000284770 FCGR1AP12314 374 aa17.47■□□□□ 0.39
PDLIM3-202ENST00000284770 FASP25445 335 aa17.47■□□□□ 0.39
PDLIM3-202ENST00000284770 SELENOWP63302 87 aa17.47■□□□□ 0.39
PDLIM3-202ENST00000284770 PSPHP78330 225 aa17.47■□□□□ 0.39
PDLIM3-202ENST00000284770 DECR1Q16698 335 aa17.47■□□□□ 0.39
PDLIM3-202ENST00000284770 AMIGO2Q86SJ2 522 aa17.47■□□□□ 0.39
PDLIM3-202ENST00000284770 PMM1Q92871 262 aa17.47■□□□□ 0.39
PDLIM3-202ENST00000284770 ZG16BQ96DA0 208 aa17.47■□□□□ 0.39
PDLIM3-202ENST00000284770 COL21A1Q96P44 957 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms