RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 ZNF767PQ75MW2 155 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 ELMOD2Q8IZ81 293 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 LILRA2Q8N149 483 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 ZNF480Q8WV37 535 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 GAB3Q8WWW8 586 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 ASB15Q8WXK1 588 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 TSACCQ96A04 125 aaPredicted RBP10.17□□□□□ -0.78
CD44-201ENST00000263398 TRMT2BQ96GJ1 504 aaKnown RBP10.17□□□□□ -0.78
CD44-201ENST00000263398 PRRC1Q96M27 445 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 SMIM14Q96QK8 99 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 DPCDQ9BVM2 203 aaPredicted RBP10.17□□□□□ -0.78
CD44-201ENST00000263398 FZD3Q9NPG1 666 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 DKKL1Q9UK85 242 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 B3GNT3Q9Y2A9 372 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 DNMT3AQ9Y6K1 912 aaPredicted RBP10.17□□□□□ -0.78
CD44-201ENST00000263398 C4AP0C0L4 1744 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 LTBP4Q8N2S1 1624 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 BORCS7-ASMTA0A0B4J1R7 106 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 MEGF11A6BM72 1044 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 LATO43561 262 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 NARSO43776 548 aaKnown RBP10.17□□□□□ -0.78
CD44-201ENST00000263398 HOXD9P28356 352 aaPredicted RBP10.17□□□□□ -0.78
CD44-201ENST00000263398 RORAP35398 523 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 NKX2-5P52952 324 aaPredicted RBP10.17□□□□□ -0.78
CD44-201ENST00000263398 HSD11B2P80365 405 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 ZMYND11Q15326 602 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 SGCAQ16586 387 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 COL28A1Q2UY09 1125 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 CDNFQ49AH0 187 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 CNIH2Q6PI25 160 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 BEST3Q8N1M1 668 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 TMEM102Q8N9M5 508 aaPredicted RBP10.17□□□□□ -0.78
CD44-201ENST00000263398 DTD2Q96FN9 168 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 MSLNLQ96KJ4 702 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 TGM7Q96PF1 710 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 SLC6A7Q99884 636 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 DPH1Q9BZG8 443 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 GMEB2Q9UKD1 530 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 GPR34Q9UPC5 381 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 SLX4Q8IY92 1834 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 C21orf33P30042 268 aaPredicted RBP10.17□□□□□ -0.78
CD44-201ENST00000263398 ZNF84P51523 738 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 WDR5P61964 334 aaKnown RBP10.17□□□□□ -0.78
CD44-201ENST00000263398 FGL1Q08830 312 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 GBX1Q14549 363 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 CHRFAM7AQ494W8 412 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 LEG1Q6P5S2 330 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 P4HA3Q7Z4N8 544 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 ZER1Q7Z7L7 766 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 TRMT10AQ8TBZ6 339 aaKnown RBP10.17□□□□□ -0.78
CD44-201ENST00000263398 HAVCR2Q8TDQ0 301 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 ACOT11Q8WXI4 607 aaPredicted RBP10.17□□□□□ -0.78
CD44-201ENST00000263398 PEX11GQ96HA9 241 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 SERINC2Q96SA4 455 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 PPIL3Q9H2H8 161 aaKnown RBP10.17□□□□□ -0.78
CD44-201ENST00000263398 TMEM185BQ9H7F4 350 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 THSD1Q9NS62 852 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 ENTPD2Q9Y5L3 495 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 CSNK1G3Q9Y6M4 447 aa10.17□□□□□ -0.78
CD44-201ENST00000263398 MAS1P04201 325 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 FBLP22087 321 aaKnown RBP10.16□□□□□ -0.78
CD44-201ENST00000263398 SOX3P41225 446 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 PRKXP51817 358 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 TCTE1Q5JU00 501 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 DESI1Q6ICB0 168 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 SLC39A5Q6ZMH5 540 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 ACOT4Q8N9L9 421 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 CYB561A3Q8NBI2 242 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 NAXEQ8NCW5 288 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 ZNF583Q96ND8 569 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 GPR174Q9BXC1 333 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.16□□□□□ -0.78
CD44-201ENST00000263398 SLC39A1Q9NY26 324 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 PPP4R1LQ9P1A2 415 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 TNRC6CQ9HCJ0 1690 aaKnown RBP10.16□□□□□ -0.78
CD44-201ENST00000263398 CENPBD1B2RD01 187 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 MEN1O00255 615 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 PRAMEF2O60811 474 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 RAD51DO75771 328 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 CAPNS1P04632 268 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 PITPNBP48739 271 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 PLP2Q04941 152 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 GRIN2CQ14957 1233 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 TBC1D25Q3MII6 688 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 SLC18B1Q6NT16 456 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 SPRED1Q7Z699 444 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 DEFB119Q8N690 84 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 OR2T35Q8NGX2 323 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 MEPEQ9NQ76 525 aaPredicted RBP10.16□□□□□ -0.78
CD44-201ENST00000263398 KCNN3Q9UGI6 736 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 MYH4Q9Y623 1939 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 NPIPA2E9PIF3 369 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 NPIPA3F8WFD2 350 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 DUX1O43812 170 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 CD3GP09693 182 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 ZNF26P17031 533 aaPredicted RBP10.16□□□□□ -0.78
CD44-201ENST00000263398 DRD5P21918 477 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 CCNOP22674 350 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 CERS1P27544 350 aa10.16□□□□□ -0.78
CD44-201ENST00000263398 HTR2AP28223 471 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms