RNA–Protein interactions for RNA: ENST00000262803.9

UPF1-201, Transcript of UPF1, RNA helicase and ATPase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF1, Length 5,348 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-201ENST00000262803 hCG_1807616A0A1W2PRN6 198 aa18.12■□□□□ 0.49
UPF1-201ENST00000262803 CST5P28325 142 aaPredicted RBP18.12■□□□□ 0.49
UPF1-201ENST00000262803 HSF5Q4G112 596 aaPredicted RBP18.12■□□□□ 0.49
UPF1-201ENST00000262803 FAM205BPQ63HN1 556 aa18.12■□□□□ 0.49
UPF1-201ENST00000262803 TLDC1Q6P9B6 456 aa18.12■□□□□ 0.49
UPF1-201ENST00000262803 OR8K5Q8NH50 307 aa18.12■□□□□ 0.49
UPF1-201ENST00000262803 NETO1Q8TDF5 533 aa18.12■□□□□ 0.49
UPF1-201ENST00000262803 MAL2Q969L2 176 aa18.12■□□□□ 0.49
UPF1-201ENST00000262803 ASB4Q9Y574 426 aa18.12■□□□□ 0.49
UPF1-201ENST00000262803 PCDHGA6Q9Y5G7 932 aa18.12■□□□□ 0.49
UPF1-201ENST00000262803 SMAD9O15198 467 aaKnown RBP18.12■□□□□ 0.49
UPF1-201ENST00000262803 ARL14Q8N4G2 192 aa18.12■□□□□ 0.49
UPF1-201ENST00000262803 SLC7A13Q8TCU3 470 aa18.12■□□□□ 0.49
UPF1-201ENST00000262803 FRS2Q8WU20 508 aa18.12■□□□□ 0.49
UPF1-201ENST00000262803 LMF2Q9BU23 707 aaKnown RBP18.12■□□□□ 0.49
UPF1-201ENST00000262803 CRB3Q9BUF7 120 aa18.12■□□□□ 0.49
UPF1-201ENST00000262803 SAGE1Q9NXZ1 904 aa18.12■□□□□ 0.49
UPF1-201ENST00000262803 GPR83Q9NYM4 423 aa18.12■□□□□ 0.49
UPF1-201ENST00000262803 ACTR10Q9NZ32 417 aa18.12■□□□□ 0.49
UPF1-201ENST00000262803 M0R233 179 aa18.12■□□□□ 0.49
UPF1-201ENST00000262803 MAP2K3P46734 347 aa18.12■□□□□ 0.49
UPF1-201ENST00000262803 NCS1P62166 190 aa18.12■□□□□ 0.49
UPF1-201ENST00000262803 NRG4Q8WWG1 115 aa18.12■□□□□ 0.49
UPF1-201ENST00000262803 IL17CQ9P0M4 197 aa18.12■□□□□ 0.49
UPF1-201ENST00000262803 RNASET2O00584 256 aaKnown RBP18.11■□□□□ 0.49
UPF1-201ENST00000262803 LBX1P52954 281 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 EMP2P54851 167 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 Q8N402 240 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 AMDHD1Q96NU7 426 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 KCNK12Q9HB15 430 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 EMCNQ9ULC0 261 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 UBE2J1Q9Y385 318 aaPredicted RBP18.11■□□□□ 0.49
UPF1-201ENST00000262803 NAALAD2Q9Y3Q0 740 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 ENPP4Q9Y6X5 453 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 DNAJC25-GNG10A0A024R161 153 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 PYCR1P32322 319 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 CXCL12P48061 93 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 SLC7A9P82251 487 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 ZNF765Q7L2R6 523 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 TMPRSS9Q7Z410 1059 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 TMEM19Q96HH6 336 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 CCDC32Q9BV29 185 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 FASLGP48023 281 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 CD97P48960 835 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 TMEM201Q5SNT2 666 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 CCBE1Q6UXH8 406 aaPredicted RBP18.11■□□□□ 0.49
UPF1-201ENST00000262803 COMMD6Q7Z4G1 85 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 CLEC1AQ8NC01 280 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 JPH3Q8WXH2 748 aaPredicted RBP18.11■□□□□ 0.49
UPF1-201ENST00000262803 SFXN2Q96NB2 322 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 ZBTB20Q9HC78 741 aaPredicted RBP18.11■□□□□ 0.49
UPF1-201ENST00000262803 SRA1Q9HD15 236 aaKnown RBP18.11■□□□□ 0.49
UPF1-201ENST00000262803 OR6C2Q9NZP2 312 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 TMEM181Q9P2C4 612 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 SCN11AQ9UI33 1791 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 SLC16A8O95907 504 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 RETP07949 1114 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 GCAP28676 217 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 MTNR1AP48039 350 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 RAB31Q13636 194 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.11■□□□□ 0.49
UPF1-201ENST00000262803 NDUFAF5Q5TEU4 345 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 RHBDD1Q8TEB9 315 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 RRNAD1Q96FB5 475 aaKnown RBP18.11■□□□□ 0.49
UPF1-201ENST00000262803 MAP3K3Q99759 626 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 RNF38Q9H0F5 515 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 IL26Q9NPH9 171 aa18.11■□□□□ 0.49
UPF1-201ENST00000262803 DCTP40126 519 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 NAA10P41227 235 aaPredicted RBP18.1■□□□□ 0.49
UPF1-201ENST00000262803 RNF144AP50876 292 aaPredicted RBP18.1■□□□□ 0.49
UPF1-201ENST00000262803 VEZF1Q14119 521 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 CDNFQ49AH0 187 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 IER5LQ5T953 404 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 UTP4Q969X6 686 aaKnown RBP18.1■□□□□ 0.49
UPF1-201ENST00000262803 GJD2Q9UKL4 321 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 LOC102723532A0A0G2JNH3 316 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 DRGXA6NNA5 263 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 ICAM2P13598 275 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 CHRNB4P30926 498 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 TAS2R31P59538 309 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 BTBD16Q32M84 506 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 LEG1Q6P5S2 330 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 GDPGP1Q6ZNW5 385 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 PRSS48Q7RTY5 328 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 PIAS4Q8N2W9 510 aaPredicted RBP18.1■□□□□ 0.49
UPF1-201ENST00000262803 CREB3L4Q8TEY5 395 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 INPP5KQ9BT40 448 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 LHPPQ9H008 270 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 CCDC88AQ3V6T2 1871 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 EEF1E1O43324 174 aaKnown RBP18.1■□□□□ 0.49
UPF1-201ENST00000262803 OSMP13725 252 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 MAN2A2P49641 1150 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 POGLUT1Q8NBL1 392 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 RCBTB1Q8NDN9 531 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 OR5L1Q8NGL2 311 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 HTR2AP28223 471 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 BMXP51813 675 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 PCBD1P61457 104 aa18.1■□□□□ 0.49
UPF1-201ENST00000262803 CYCSP99999 105 aaKnown RBP18.1■□□□□ 0.49
UPF1-201ENST00000262803 RNASE10Q5GAN6 216 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms