RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 ZNF155Q12901 538 aaPredicted RBP9.52□□□□□ -0.89
PALB2-201ENST00000261584 GFOD2Q3B7J2 385 aa9.52□□□□□ -0.89
PALB2-201ENST00000261584 FAHD1Q6P587 224 aa9.52□□□□□ -0.89
PALB2-201ENST00000261584 SLCO4C1Q6ZQN7 724 aa9.52□□□□□ -0.89
PALB2-201ENST00000261584 GPR135Q8IZ08 494 aa9.52□□□□□ -0.89
PALB2-201ENST00000261584 ZNF527Q8NB42 609 aa9.52□□□□□ -0.89
PALB2-201ENST00000261584 NAXEQ8NCW5 288 aa9.52□□□□□ -0.89
PALB2-201ENST00000261584 NUP43Q8NFH3 380 aa9.52□□□□□ -0.89
PALB2-201ENST00000261584 LCN9Q8WX39 176 aa9.52□□□□□ -0.89
PALB2-201ENST00000261584 SNX18Q96RF0 628 aa9.52□□□□□ -0.89
PALB2-201ENST00000261584 ALG8Q9BVK2 526 aa9.52□□□□□ -0.89
PALB2-201ENST00000261584 BHLHE41Q9C0J9 482 aaPredicted RBP9.52□□□□□ -0.89
PALB2-201ENST00000261584 FN3KQ9H479 309 aa9.52□□□□□ -0.89
PALB2-201ENST00000261584 KLK4Q9Y5K2 254 aa9.52□□□□□ -0.89
PALB2-201ENST00000261584 GREB1LQ9C091 1923 aaPredicted RBP9.51□□□□□ -0.89
PALB2-201ENST00000261584 UBE2QL1A1L167 161 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 IGLON5A6NGN9 336 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 ARPC1BO15143 372 aaKnown RBP9.51□□□□□ -0.89
PALB2-201ENST00000261584 RGS11O94810 467 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 ALX3O95076 343 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 CLUP10909 449 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 IL1RNP18510 177 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 CTNNB1P35222 781 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 RFX2P48378 723 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 AKR1C2P52895 323 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 PSMA6P60900 246 aaKnown RBP9.51□□□□□ -0.89
PALB2-201ENST00000261584 AKR1C1Q04828 323 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 EIF4HQ15056 248 aaKnown RBP9.51□□□□□ -0.89
PALB2-201ENST00000261584 ACBD7Q8N6N7 88 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 GDPD1Q8N9F7 314 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 SDR9C7Q8NEX9 313 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 TMEM255BQ8WV15 326 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 NDC1Q9BTX1 674 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 SRRQ9GZT4 340 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 TAAR2Q9P1P5 351 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 ERVW-1Q9UQF0 538 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 TMEM5Q9Y2B1 443 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 CDH23Q9H251 3354 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 UNC80Q8N2C7 3258 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 H3BUI4 141 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 RNASET2O00584 256 aaKnown RBP9.51□□□□□ -0.89
PALB2-201ENST00000261584 FCMRO60667 390 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 LDB3O75112 727 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 WISP3O95389 354 aaPredicted RBP9.51□□□□□ -0.89
PALB2-201ENST00000261584 PPP1R3DO95685 299 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 F11P03951 625 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 ASGR2P07307 311 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 TRIM23P36406 574 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 ST3GAL3Q11203 375 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 SNTA1Q13424 505 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 PUM1Q14671 1186 aaKnown RBP eCLIP9.51□□□□□ -0.89
PALB2-201ENST00000261584 TCEAL5Q5H9L2 206 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 CHST4Q8NCG5 386 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 CASTOR1Q8WTX7 329 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 OR8D1Q8WZ84 308 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 IRF7Q92985 503 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 CASD1Q96PB1 797 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 ERMAPQ96PL5 475 aaPredicted RBP9.51□□□□□ -0.89
PALB2-201ENST00000261584 SEC22CQ9BRL7 303 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 C1QTNF3Q9BXJ4 246 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 LMAN2LQ9H0V9 348 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 ZMAT3Q9HA38 289 aaKnown RBP9.51□□□□□ -0.89
PALB2-201ENST00000261584 RCE1Q9Y256 329 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 KHNYNO15037 678 aaKnown RBP9.51□□□□□ -0.89
PALB2-201ENST00000261584 H2AFB2P0C5Z0 115 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 CYBAP13498 195 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 ENDOUP21128 410 aaKnown RBP9.51□□□□□ -0.89
PALB2-201ENST00000261584 KHKP50053 298 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 HTRA3P83110 453 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 ZNF627Q7L945 461 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 CCDC190Q86UF4 302 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 PROKR2Q8NFJ6 384 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 OR52E2Q8NGJ4 325 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 RPLP0P6Q8NHW5 317 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 FANK1Q8TC84 345 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 CXorf40BQ96DE9 158 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 C4orf36Q96KX1 117 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 CD180Q99467 661 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 NARFLQ9H6Q4 476 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 KRCC1Q9NPI7 259 aaPredicted RBP9.51□□□□□ -0.89
PALB2-201ENST00000261584 TRIM36Q9NQ86 728 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 PAK6Q9NQU5 681 aaPredicted RBP9.51□□□□□ -0.89
PALB2-201ENST00000261584 KCMF1Q9P0J7 381 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 PLEKHM1Q9Y4G2 1056 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 PCDHGB2Q9Y5G2 931 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 KCNE3Q9Y6H6 103 aa9.51□□□□□ -0.89
PALB2-201ENST00000261584 SH3D21A4FU49 640 aa9.5□□□□□ -0.89
PALB2-201ENST00000261584 GRXCR2A6NFK2 248 aa9.5□□□□□ -0.89
PALB2-201ENST00000261584 GAPDHSO14556 408 aaPredicted RBP9.5□□□□□ -0.89
PALB2-201ENST00000261584 TGM5O43548 720 aa9.5□□□□□ -0.89
PALB2-201ENST00000261584 OR6A2O95222 327 aa9.5□□□□□ -0.89
PALB2-201ENST00000261584 ITGA3P26006 1051 aa9.5□□□□□ -0.89
PALB2-201ENST00000261584 CTGFP29279 349 aa9.5□□□□□ -0.89
PALB2-201ENST00000261584 UGT2B10P36537 528 aa9.5□□□□□ -0.89
PALB2-201ENST00000261584 SLC6A11P48066 632 aa9.5□□□□□ -0.89
PALB2-201ENST00000261584 BIKQ13323 160 aa9.5□□□□□ -0.89
PALB2-201ENST00000261584 DEFB110Q30KQ9 67 aa9.5□□□□□ -0.89
PALB2-201ENST00000261584 GET4Q7L5D6 327 aaPredicted RBP9.5□□□□□ -0.89
PALB2-201ENST00000261584 L3MBTL4Q8NA19 623 aa9.5□□□□□ -0.89
PALB2-201ENST00000261584 OR2T33Q8NG76 320 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms