RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 ABATP80404 500 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 MRPS15P82914 257 aaKnown RBP14.26□□□□□ -0.13
DDX56-201ENST00000258772 ZNF155Q12901 538 aaPredicted RBP14.26□□□□□ -0.13
DDX56-201ENST00000258772 DSG2Q14126 1118 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 KIAA0100Q14667 2235 aaKnown RBP14.26□□□□□ -0.13
DDX56-201ENST00000258772 PDGFRLQ15198 375 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 DECR1Q16698 335 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 C16orf62Q7Z3J2 963 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 UBE2J2Q8N2K1 259 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 ARIH2OSQ8N7S6 290 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 SLC7A6Q92536 515 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 KAT2AQ92830 837 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 SMARCD2Q92925 531 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 GIMAP5Q96F15 307 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 DCLRE1CQ96SD1 692 aaKnown RBP14.26□□□□□ -0.13
DDX56-201ENST00000258772 SOSTQ9BQB4 213 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 ZNF649Q9BS31 505 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 BTBD1Q9H0C5 482 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 KLHL28Q9NXS3 571 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 SPHK1Q9NYA1 384 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 SERGEFQ9UGK8 458 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 NDRG2Q9UN36 371 aaKnown RBP14.26□□□□□ -0.13
DDX56-201ENST00000258772 ZNF232Q9UNY5 417 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 C5orf42Q9H799 3197 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 THY1P04216 161 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 MYL9P24844 172 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 FPR3P25089 353 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 PEBP1P30086 187 aaKnown RBP14.26□□□□□ -0.13
DDX56-201ENST00000258772 PRKAR1BP31321 381 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 WASP42768 502 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 GPR4P46093 362 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 RGS8P57771 180 aaPredicted RBP14.26□□□□□ -0.13
DDX56-201ENST00000258772 COL9A2Q14055 689 aaPredicted RBP14.26□□□□□ -0.13
DDX56-201ENST00000258772 CST6Q15828 149 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 SLC35A4Q96G79 324 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 FRMD6Q96NE9 622 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 DEPDC7Q96QD5 511 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 HDHD5Q9BXW7 423 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 ACTRT3Q9BYD9 372 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 PPP1R3EQ9H7J1 279 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 RNF121Q9H920 327 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 PRKAG2Q9UGJ0 569 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 NUFIP1Q9UHK0 495 aaKnown RBP14.26□□□□□ -0.13
DDX56-201ENST00000258772 ZFR2Q9UPR6 939 aaKnown RBP14.26□□□□□ -0.13
DDX56-201ENST00000258772 EXOGQ9Y2C4 368 aaKnown RBP14.26□□□□□ -0.13
DDX56-201ENST00000258772 ZNF780BQ9Y6R6 833 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 CEACAM5P06731 702 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 CELP19835 753 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 TEAD1P28347 426 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 TSFMP43897 325 aaKnown RBP14.25□□□□□ -0.13
DDX56-201ENST00000258772 PDX1P52945 283 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 LRRC32Q14392 662 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 LTB4RQ15722 352 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 CNIH2Q6PI25 160 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 PLEKHM3Q6ZWE6 761 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 GDF7Q7Z4P5 450 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 NRMQ8IXM6 262 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 HDDC3Q8N4P3 179 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 ADAMTS15Q8TE58 950 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 MCHR1Q99705 422 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 COQ7Q99807 217 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 TMED9Q9BVK6 235 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 TEX12Q9BXU0 123 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 TBC1D17Q9HA65 648 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 DPP7Q9UHL4 492 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 A0A0B4J293 547 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 KLF4O43474 513 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 AKAP8O43823 692 aaKnown RBP14.25□□□□□ -0.13
DDX56-201ENST00000258772 HLA-DPB1P04440 258 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 ASGR2P07307 311 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 GAAP10253 952 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 ERVK-21P61565 698 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 ACSM1Q08AH1 577 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 CDK10Q15131 360 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 TMEM44Q2T9K0 475 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 PGGHGQ32M88 737 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 C6orf132Q5T0Z8 1188 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 C6orf183Q5T699 404 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 LCN1P1Q5VSP4 162 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 GALNT12Q8IXK2 581 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 KLHL36Q8N4N3 616 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 MFSD9Q8NBP5 474 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 BBS1Q8NFJ9 593 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 RNF31Q96EP0 1072 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 ATF6BQ99941 703 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 C6orf106Q9H6K1 298 aaPredicted RBP14.25□□□□□ -0.13
DDX56-201ENST00000258772 MED17Q9NVC6 651 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 MOSPD1Q9UJG1 213 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 ATG2BQ96BY7 2078 aa14.25□□□□□ -0.13
DDX56-201ENST00000258772 A0A1W2PP55 124 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 SHISA3A0PJX4 238 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 PRR19A6NJB7 356 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 A6NL46 340 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 HPGDSO60760 199 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 IGHA1P01876 353 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 HLA-DQB1P01920 261 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 SLC2A2P11168 524 aaPredicted RBP14.24□□□□□ -0.13
DDX56-201ENST00000258772 METAP1DQ6UB28 335 aaPredicted RBP14.24□□□□□ -0.13
DDX56-201ENST00000258772 MBOAT2Q6ZWT7 520 aa14.24□□□□□ -0.13
DDX56-201ENST00000258772 MARCH9Q86YJ5 346 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms