RNA–Protein interactions for RNA: ENST00000255320.6

HMGB1P5-201, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 642 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-201ENST00000255320 C11orf98E9PRG8 122 aa3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 CPLX1O14810 134 aa3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 CTAGE5O15320 804 aa3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 PHF1O43189 567 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 LRRTM2O43300 516 aa3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 EFNA2O43921 213 aa3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 ZNF253O75346 499 aa3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 JCHAINP01591 159 aa3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 ANXA3P12429 323 aa3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 PVRP15151 417 aa3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 CAPN2P17655 700 aa3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 BRCC3P46736 316 aa3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 ABRAXAS2Q15018 415 aa3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 LTB4RQ15722 352 aa3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 TMEM52BQ4KMG9 183 aa3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 CYBRD1Q53TN4 286 aa3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 NCR3LG1Q68D85 454 aa3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 SLC22A18ASQ8N1D0 253 aa3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 RFESDQ8TAC1 157 aa3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 TBCKQ8TEA7 893 aa3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 OSTF1Q92882 214 aa3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 RBM18Q96H35 190 aaKnown RBP3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 TMEM121Q9BTD3 319 aa3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 RIBC2Q9H4K1 309 aa3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 COG4Q9H9E3 785 aa3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 UTP6Q9NYH9 597 aaKnown RBP3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 ARMCX1Q9P291 453 aa3.38□□□□□ -1.87
HMGB1P5-201ENST00000255320 ZNF840PA6NDX5 716 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 ZSCAN5CA6NGD5 496 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 DUX1O43812 170 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 JAK2O60674 1132 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 RAMP1O60894 148 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 CRLF1O75462 422 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 NEBLO76041 1014 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 UFL1O94874 794 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 MFN2O95140 757 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 XRCC1P18887 633 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 BCL3P20749 454 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 HNRNPA2B1P22626 353 aaKnown RBP3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 CALRP27797 417 aaKnown RBP3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 SHC1P29353 583 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 CA8P35219 290 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 HMGCLP35914 325 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 RPL4P36578 427 aaKnown RBP3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 OR1D4P47884 311 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 SNTB2Q13425 540 aaKnown RBP3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 CHI3L2Q15782 390 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 SLC36A3Q495N2 470 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 SEL1L3Q68CR1 1132 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 CES3Q6UWW8 571 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 CENPUQ71F23 418 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 CEACAM19Q7Z692 300 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 PARGQ86W56 976 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 HSCBQ8IWL3 235 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 RASL10AQ92737 203 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 THRSPQ92748 146 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 RANBP9Q96S59 729 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 ERP44Q9BS26 406 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 GSDMCQ9BYG8 508 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 MEAF6Q9HAF1 191 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 PALMDQ9NP74 551 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 FARSBQ9NSD9 589 aaKnown RBP3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 CLEC5AQ9NY25 188 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 DHRS4-AS1Q9P1J3 65 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 GALPQ9UBC7 116 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 BARX2Q9UMQ3 279 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 EIF3LQ9Y262 564 aaKnown RBP3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 NTNG1Q9Y2I2 539 aa3.37□□□□□ -1.87
HMGB1P5-201ENST00000255320 TRAV9-2A0A087WT02 112 aa3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 ZSCAN5BA6NJL1 495 aa3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 SAP18O00422 153 aaKnown RBP3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 CASKO14936 926 aa3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 XPO1O14980 1071 aaKnown RBP3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 PPIHO43447 177 aaKnown RBP3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 SH3BGRLO75368 114 aa3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 IDH1O75874 414 aaKnown RBP3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 KBTBD11O94819 623 aa3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 GAS8-AS1O95177 125 aa3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 ANP32DO95626 131 aa3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 CGAP01215 116 aa3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 OPN1LWP04000 364 aa3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 IGFBP1P08833 259 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 IQCF3P0C7M6 154 aa3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 ELK3P41970 407 aa3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 KRTAP10-9P60411 292 aa3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 PLOD1Q02809 727 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 ZFP36L1Q07352 338 aaKnown RBP3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 COX10Q12887 443 aa3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 CNPY1Q3B7I2 92 aa3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 NADK2Q4G0N4 442 aa3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 LGSNQ5TDP6 509 aa3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 SLX4IPQ5VYV7 408 aa3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 ZNF772Q68DY9 489 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 STAC2Q6ZMT1 411 aa3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 HSD11B1LQ7Z5J1 315 aa3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 ANKRD37Q7Z713 158 aa3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 ZDHHC21Q8IVQ6 265 aa3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 TADA1Q96BN2 335 aa3.36□□□□□ -1.87
HMGB1P5-201ENST00000255320 VPS39Q96JC1 886 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms