RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 IRF4Q15306 451 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 C6orf132Q5T0Z8 1188 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 FAM46CQ5VWP2 391 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 OR7G1Q8NGA0 311 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 GATAD2BQ8WXI9 593 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 GIMAP5Q96F15 307 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 ST6GAL2Q96JF0 529 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 WDFY2Q96P53 400 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 CCDC32Q9BV29 185 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 TRMT61BQ9BVS5 477 aaKnown RBP9.48□□□□□ -0.89
COPB1-201ENST00000249923 CHIAQ9BZP6 476 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 OR2B2Q9GZK3 357 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 RACGAP1Q9H0H5 632 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 IQCMA0A1B0GVH7 501 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 EFCAB14O75071 495 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 YES1P07947 543 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 NR2F1P10589 423 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 PRKACBP22694 351 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 CXCR2P25025 360 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 SDC2P34741 201 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 SSR2P43308 183 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 RNF144AP50876 292 aaPredicted RBP9.48□□□□□ -0.89
COPB1-201ENST00000249923 FABP5Q01469 135 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 CHRNEQ04844 493 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.48□□□□□ -0.892e-6■■■■□ 19.8
COPB1-201ENST00000249923 TIMM50Q3ZCQ8 353 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 BMPERQ8N8U9 685 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 BBS1Q8NFJ9 593 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 OR4Q3Q8NH05 313 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 DIO2Q92813 273 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 EFHD2Q96C19 240 aaPredicted RBP9.48□□□□□ -0.89
COPB1-201ENST00000249923 MSLNLQ96KJ4 702 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 PRRC1Q96M27 445 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 C12orf66Q96MD2 445 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 ZNF607Q96SK3 696 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 KATNB1Q9BVA0 655 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 TMED9Q9BVK6 235 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 BCL2L10Q9HD36 194 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 SEC14L4Q9UDX3 406 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 APOBEC3BQ9UH17 382 aaKnown RBP9.48□□□□□ -0.89
COPB1-201ENST00000249923 SPTBP11277 2137 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 DOCK8Q8NF50 2099 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 LOC102723532A0A0G2JNH3 316 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 A0A1W2PQL4 384 aaPredicted RBP9.48□□□□□ -0.89
COPB1-201ENST00000249923 LINC01553A4QN01 128 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 ISM1B1AKI9 464 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 ERAL1O75616 437 aaKnown RBP9.48□□□□□ -0.89
COPB1-201ENST00000249923 EML2O95834 649 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 HNRNPA1P09651 372 aaKnown RBP eCLIP9.48□□□□□ -0.89
COPB1-201ENST00000249923 CSF3P09919 207 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 BUD31P41223 144 aaPredicted RBP9.48□□□□□ -0.89
COPB1-201ENST00000249923 MC3RP41968 323 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 SMSP52788 366 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 CLDN2P57739 230 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 PXDC1Q5TGL8 231 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 ABHD17CQ6PCB6 329 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 NKAIN4Q8IVV8 208 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 ACOT4Q8N9L9 421 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 SMG7Q92540 1137 aaKnown RBP9.48□□□□□ -0.89
COPB1-201ENST00000249923 ARSGQ96EG1 525 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 ZNF681Q96N22 645 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 FRMD6Q96NE9 622 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 CAMK1GQ96NX5 476 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 TIMP4Q99727 224 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 NT5DC2Q9H857 520 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 IMP3Q9NV31 184 aaKnown RBP9.48□□□□□ -0.89
COPB1-201ENST00000249923 ADAM29Q9UKF5 820 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 SNX7Q9UNH6 387 aa9.48□□□□□ -0.89
COPB1-201ENST00000249923 CACNB4O00305 520 aaPredicted RBP9.47□□□□□ -0.89
COPB1-201ENST00000249923 ERI3O43414 337 aaKnown RBP9.47□□□□□ -0.89
COPB1-201ENST00000249923 PIP5K1CO60331 668 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 CLEC3AO75596 197 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 OR2B3O76000 313 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 NCR1O76036 304 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 SLC2A10O95528 541 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 PAK4O96013 591 aaPredicted RBP9.47□□□□□ -0.89
COPB1-201ENST00000249923 PRKCAP17252 672 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 HIST1H1TP22492 207 aaPredicted RBP9.47□□□□□ -0.89
COPB1-201ENST00000249923 SSTR2P30874 369 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 TRIM23P36406 574 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 OMPP47874 163 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 GPLD1P80108 840 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 ZNF155Q12901 538 aaPredicted RBP9.47□□□□□ -0.89
COPB1-201ENST00000249923 FAM209AQ5JX71 171 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 FAM111BQ6SJ93 734 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 OR9A2Q8NGT5 310 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 LRRC20Q8TCA0 184 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 SLC9A6Q92581 669 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 PMEPA1Q969W9 287 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 FAM46AQ96IP4 442 aaKnown RBP9.47□□□□□ -0.89
COPB1-201ENST00000249923 GDF15Q99988 308 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 SAP130Q9H0E3 1048 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 FAM172BPA6NC97 362 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 CDC42EP2O14613 210 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 SERPINI2O75830 405 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 RAB36O95755 333 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 PKLRP30613 574 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 RORCP51449 518 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 LHFPL3Q86UP9 236 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 NR2C2APQ86WQ0 139 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms