RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 PRNPP04156 253 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 MTNR1AP48039 350 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 STK11Q15831 433 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 SLC35B4Q969S0 331 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 ACACAQ13085 2346 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 TRBV4-1A0A0J9YWV2 114 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 SLC16A5O15375 505 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 CD1EP15812 388 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 UBE2MP61081 183 aaKnown RBP7.13□□□□□ -1.27
RIF1-201ENST00000243326 PPA1Q15181 289 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 GRASPQ7Z6J2 395 aaPredicted RBP7.13□□□□□ -1.27
RIF1-201ENST00000243326 RETREG3Q86VR2 466 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 ZC3H3Q8IXZ2 948 aaKnown RBP7.13□□□□□ -1.27
RIF1-201ENST00000243326 CADM3Q8N126 398 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 SCGB1C1Q8TD33 95 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 CREB3L4Q8TEY5 395 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 SLCO3A1Q9UIG8 710 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 MANSC4A6NHS7 340 aaPredicted RBP7.13□□□□□ -1.27
RIF1-201ENST00000243326 SLC22A5O76082 557 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 ADRB3P13945 408 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 IL17RDQ8NFM7 739 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 OR2T11Q8NH01 316 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 ANKRD34BA5PLL1 514 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 E9PI62 339 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 PTTG1O95997 202 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 ARNTP27540 789 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 C7orf61Q8IZ16 206 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 OR5W2Q8NH69 310 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 ARNTL2Q8WYA1 636 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 NUMBLQ9Y6R0 609 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 HOXB5P09067 269 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 HNF1AP20823 631 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 CRHBPP24387 322 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 NRG3P56975 720 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 LMAN2Q12907 356 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 CAMK1GQ96NX5 476 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 RHBDD3Q9Y3P4 386 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 ZCWPW2A0A1B0GU75 182 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 C7P10643 843 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 CFL1P23528 166 aaKnown RBP7.13□□□□□ -1.27
RIF1-201ENST00000243326 IRF5Q13568 498 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 LRP11Q86VZ4 500 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 ALDH16A1Q8IZ83 802 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 MINDY1Q8N5J2 469 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 OR9A2Q8NGT5 310 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 OR9A1PQ8NGU1 263 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 HEBP2Q9Y5Z4 205 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 GPR155Q7Z3F1 870 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 TSGA13Q96PP4 275 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 NKX3-1Q99801 234 aaPredicted RBP7.13□□□□□ -1.27
RIF1-201ENST00000243326 BIN3Q9NQY0 253 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 ARHGAP33O14559 1287 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 HNRNPFP52597 415 aaKnown RBP7.13□□□□□ -1.27
RIF1-201ENST00000243326 CTBP2P56545 445 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 APOOLQ6UXV4 268 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 OR4Q3Q8NH05 313 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 CNOT9Q92600 299 aaKnown RBP7.13□□□□□ -1.27
RIF1-201ENST00000243326 ECHDC3Q96DC8 303 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 SAMD11Q96NU1 681 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 METTL7AQ9H8H3 244 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 FABP7O15540 132 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 CRTAPO75718 401 aaPredicted RBP7.13□□□□□ -1.27
RIF1-201ENST00000243326 ADORA3P0DMS8 318 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 CCNJQ5T5M9 372 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 PHF19Q5T6S3 580 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 SLC22A10Q63ZE4 541 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 OR8J3Q8NGG0 315 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 SYNPRQ8TBG9 265 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 CRB3Q9BUF7 120 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 METTL17Q9H7H0 456 aaPredicted RBP7.13□□□□□ -1.27
RIF1-201ENST00000243326 RXFP3Q9NSD7 469 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 KAT7O95251 611 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 PRKXP51817 358 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 VASH1Q7L8A9 365 aaPredicted RBP7.12□□□□□ -1.27
RIF1-201ENST00000243326 KREMEN2Q8NCW0 462 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 C11orf54Q9H0W9 315 aaPredicted RBP7.12□□□□□ -1.27
RIF1-201ENST00000243326 SLC28A3Q9HAS3 691 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 CHST11Q9NPF2 352 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 MED16Q9Y2X0 877 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 SGCBQ16585 318 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 DEFB134Q4QY38 66 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 DPH7Q9BTV6 452 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 SCP2D1Q9UJQ7 156 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 PMM2O15305 246 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 TSPAN15O95858 294 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 IQCF3P0C7M6 154 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 CERS1P27544 350 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 PSMB5P28074 263 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 AKR1C3P42330 323 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 SPOCK1Q08629 439 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 GRIK2Q13002 908 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 OR8J2Q8NGG1 315 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 GAS2L1Q99501 681 aaPredicted RBP7.12□□□□□ -1.27
RIF1-201ENST00000243326 RAB11BQ15907 218 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 MUL1Q969V5 352 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 TDP1Q9NUW8 608 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 COPS7AQ9UBW8 275 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 C10orf71Q711Q0 1435 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 H0Y8G0 127 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 FBXO24O75426 580 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms