RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 CLEC3AO75596 197 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 PAHP00439 452 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 SSTR4P31391 388 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 ACY1Q03154 408 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 RBBP4Q09028 425 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 CCNJQ5T5M9 372 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 BCL2L15Q5TBC7 163 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 HAGHLQ6PII5 290 aaPredicted RBP10.39□□□□□ -0.75
COPA-201ENST00000241704 TP53I13Q8NBR0 393 aaPredicted RBP10.39□□□□□ -0.75
COPA-201ENST00000241704 NETO1Q8TDF5 533 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 NAT6Q93015 286 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 F2RL3Q96RI0 385 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 IL4I1Q96RQ9 567 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 NTMT1Q9BV86 223 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 TMEM265A0A087WTH1 108 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 A0A1B0GVI7 797 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 BCAT2O15382 392 aaPredicted RBP10.39□□□□□ -0.75
COPA-201ENST00000241704 B4GALT3O60512 393 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 SLC43A1O75387 559 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 H1F0P07305 194 aaKnown RBP10.39□□□□□ -0.75
COPA-201ENST00000241704 AOAHP28039 575 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 PRDX3P30048 256 aaKnown RBP10.39□□□□□ -0.75
COPA-201ENST00000241704 P2RY2P41231 377 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 CASP6P55212 293 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 NKX3-2P78367 333 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 FLI1Q01543 452 aaPredicted RBP10.39□□□□□ -0.75
COPA-201ENST00000241704 TEKQ02763 1124 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 LASP1Q14847 261 aaKnown RBP10.39□□□□□ -0.75
COPA-201ENST00000241704 SLC35F1Q5T1Q4 408 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 LRRC69Q6ZNQ3 347 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 ATCAYQ86WG3 371 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 FAM217AQ8IXS0 508 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 IZUMO1Q8IYV9 350 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 MAFAQ8NHW3 353 aaPredicted RBP10.39□□□□□ -0.75
COPA-201ENST00000241704 RFKQ969G6 155 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 ZNF436Q9C0F3 470 aaPredicted RBP10.39□□□□□ -0.75
COPA-201ENST00000241704 GPN1Q9HCN4 374 aaPredicted RBP10.39□□□□□ -0.75
COPA-201ENST00000241704 ZNF175Q9Y473 711 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 DNMT3AQ9Y6K1 912 aaPredicted RBP10.39□□□□□ -0.75
COPA-201ENST00000241704 E7EQ34 232 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 CKMT1AP12532 417 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 PBX2P40425 430 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 GBX2P52951 348 aaPredicted RBP10.38□□□□□ -0.75
COPA-201ENST00000241704 CTSCP53634 463 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 PTGES3Q15185 160 aaKnown RBP10.38□□□□□ -0.75
COPA-201ENST00000241704 CPZQ66K79 652 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 SLC30A6Q6NXT4 461 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 MSANTD1Q6ZTZ1 278 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 FTMTQ8N4E7 242 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 ST8SIA2Q92186 375 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 DAZLQ92904 295 aaKnown RBP10.38□□□□□ -0.75
COPA-201ENST00000241704 SPNS1Q9H2V7 528 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 RNF167Q9H6Y7 350 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 TBC1D17Q9HA65 648 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 PPP6CO00743 305 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 AKAP8O43823 692 aaKnown RBP10.38□□□□□ -0.75
COPA-201ENST00000241704 CACNG3O60359 315 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 C1SP09871 688 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 ZNF823P16415 610 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 ITGA3P26006 1051 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 TMEM35AQ53FP2 167 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 IGSF11Q5DX21 431 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 RNASE12Q5GAN4 147 aaKnown RBP10.38□□□□□ -0.75
COPA-201ENST00000241704 C1orf189Q5VU69 101 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 LIPKQ5VXJ0 399 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 ZNF613Q6PF04 617 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 NLGN4XQ8N0W4 816 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 HMGCLL1Q8TB92 370 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 GPR78Q96P69 363 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 DUSP23Q9BVJ7 150 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 ACTL8Q9H568 366 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 VAPAQ9P0L0 249 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 A0A1W2PPL8 197 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 PGRMC2O15173 223 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 SSX5O60225 188 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 APOC1P02654 83 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 GGT2P36268 569 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 DAPP51397 102 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 AFMIDQ63HM1 303 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 SLC22A15Q8IZD6 547 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 DNAJC22Q8N4W6 341 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 LINC00471Q8N535 108 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 OR5T2Q8NGG2 359 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 OR4C6Q8NH72 309 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 THAP3Q8WTV1 239 aaPredicted RBP10.38□□□□□ -0.75
COPA-201ENST00000241704 ASB11Q8WXH4 323 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 MOAP1Q96BY2 351 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 ZNF583Q96ND8 569 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 ABCG5Q9H222 651 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 WASH6PQ9NQA3 447 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 ACTR10Q9NZ32 417 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 PRODH2Q9UF12 536 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 SLC23A1Q9UHI7 598 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 POLR2AP24928 1970 aaKnown RBP10.38□□□□□ -0.75
COPA-201ENST00000241704 UBFD1O14562 309 aaKnown RBP10.38□□□□□ -0.75
COPA-201ENST00000241704 TOXO94900 526 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 ACADLP28330 430 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 OTX2P32243 289 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 CTHP32929 405 aa10.38□□□□□ -0.75
COPA-201ENST00000241704 ACSL1P33121 698 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms