RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 TOR1AO14656 332 aa13.08□□□□□ -0.32
HCFC2-201ENST00000229330 HTR3AP46098 478 aa13.08□□□□□ -0.32
HCFC2-201ENST00000229330 STK11Q15831 433 aa13.08□□□□□ -0.32
HCFC2-201ENST00000229330 ZNF674Q2M3X9 581 aa13.08□□□□□ -0.32
HCFC2-201ENST00000229330 OR2G6Q5TZ20 316 aa13.08□□□□□ -0.32
HCFC2-201ENST00000229330 KIAA1211LQ6NV74 962 aa13.08□□□□□ -0.32
HCFC2-201ENST00000229330 COMMD6Q7Z4G1 85 aa13.08□□□□□ -0.32
HCFC2-201ENST00000229330 SSX3Q99909 188 aa13.08□□□□□ -0.32
HCFC2-201ENST00000229330 BOCQ9BWV1 1114 aa13.08□□□□□ -0.32
HCFC2-201ENST00000229330 AMBRA1Q9C0C7 1298 aa13.08□□□□□ -0.32
HCFC2-201ENST00000229330 A0A1W2PQ45 241 aaPredicted RBP13.07□□□□□ -0.32
HCFC2-201ENST00000229330 A0A1W2PQY0 241 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 TSTD3H0UI37 97 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 ACP5P13686 325 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 ERVFC1P60507 584 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 TBPL1P62380 186 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 RING1Q06587 406 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 TMEM115Q12893 351 aaPredicted RBP13.07□□□□□ -0.32
HCFC2-201ENST00000229330 GNMTQ14749 295 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 TRNP1Q6NT89 227 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 TMEM175Q9BSA9 504 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 SLC12A9Q9BXP2 914 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 SAP130Q9H0E3 1048 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 CNIH4Q9P003 139 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 TCRBV5S1A1TA0A578 114 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 TSPAN6O43657 245 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 LDLRAD1Q5T700 205 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 TMEM163Q8TC26 289 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 ADAMTS14Q8WXS8 1223 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 SLC22A18Q96BI1 424 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 MBOAT4Q96T53 435 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 RBM38Q9H0Z9 239 aaKnown RBP13.07□□□□□ -0.32
HCFC2-201ENST00000229330 CARS2Q9HA77 564 aaKnown RBP13.07□□□□□ -0.32
HCFC2-201ENST00000229330 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.07□□□□□ -0.32
HCFC2-201ENST00000229330 TMEM14AQ9Y6G1 99 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 CSNK1G3Q9Y6M4 447 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 H7BY64 318 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 GSRP00390 522 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 CSTBP04080 98 aaKnown RBP13.07□□□□□ -0.32
HCFC2-201ENST00000229330 M6PRP20645 277 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 RAB5CP51148 216 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 RPS25P62851 125 aaKnown RBP13.07□□□□□ -0.32
HCFC2-201ENST00000229330 GHRHRQ02643 423 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 TCEAL6Q6IPX3 200 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 GRHL2Q6ISB3 625 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 C22orf39Q6P5X5 142 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 IL20RBQ6UXL0 311 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 SETD7Q8WTS6 366 aaKnown RBP13.07□□□□□ -0.32
HCFC2-201ENST00000229330 KCTD12Q96CX2 325 aaKnown RBP13.07□□□□□ -0.32
HCFC2-201ENST00000229330 PRAP1Q96NZ9 151 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 QRSL1Q9H0R6 528 aaKnown RBP13.07□□□□□ -0.32
HCFC2-201ENST00000229330 Q9N2J8 555 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 ABRACLQ9P1F3 81 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 RCE1Q9Y256 329 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 LAMA4Q16363 1823 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 A0A1W2PRU2 124 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 ZNF208O43345 1280 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 AKAIN1P0CW23 69 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 GRPRP30550 384 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 MAGEA11P43364 429 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 PSPHP78330 225 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 ZNF169Q14929 603 aaPredicted RBP13.07□□□□□ -0.32
HCFC2-201ENST00000229330 SSX2Q16385 188 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 MINDY4Q4G0A6 757 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 SPIN3Q5JUX0 258 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 KCTD18Q6PI47 426 aaPredicted RBP13.07□□□□□ -0.32
HCFC2-201ENST00000229330 ZNF546Q86UE3 836 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 C3orf49Q96BT1 292 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 NECTIN4Q96NY8 510 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 GSX2Q9BZM3 304 aa13.07□□□□□ -0.32
HCFC2-201ENST00000229330 NAV1Q8NEY1 1877 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 A8MUA0 341 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 GRXCR1A8MXD5 290 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 AGPAT2O15120 278 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 MUSKO15146 869 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 RAB3DO95716 219 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 ILF3Q12906 894 aaKnown RBP eCLIP13.06□□□□□ -0.32
HCFC2-201ENST00000229330 AQP6Q13520 282 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 MBTPS1Q14703 1052 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 PSRC1Q6PGN9 363 aaPredicted RBP13.06□□□□□ -0.32
HCFC2-201ENST00000229330 ZNF551Q7Z340 670 aaPredicted RBP13.06□□□□□ -0.32
HCFC2-201ENST00000229330 TPRA1Q86W33 373 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 OR52E2Q8NGJ4 325 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 ANGPTL6Q8NI99 470 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 METTL21AQ8WXB1 218 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 OR6C65A6NJZ3 312 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 FZD7O75084 574 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 TCRBP04435 133 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 ATP5A1P25705 553 aaKnown RBP13.06□□□□□ -0.32
HCFC2-201ENST00000229330 GLP1RP43220 463 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 SLC11A1P49279 550 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 P2RX3P56373 397 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 MAPK14Q16539 360 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 CHRFAM7AQ494W8 412 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 KDM4DQ6B0I6 523 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 Q6ZVL8 140 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 RAB11FIP2Q7L804 512 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 OR10K1Q8NGX5 313 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 OR2T11Q8NH01 316 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 SMAP2Q8WU79 429 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms