RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 CLCA2Q9UQC9 943 aa15.24■□□□□ 0.03
LTBR-201ENST00000228918 PLEKHM1Q9Y4G2 1056 aa15.24■□□□□ 0.03
LTBR-201ENST00000228918 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.23■□□□□ 0.03
LTBR-201ENST00000228918 PLA2G10O15496 165 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 CH25HO95992 272 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 CCNYL3P0C7X3 344 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 PRKCAP17252 672 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 PRKAR1BP31321 381 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 MPIP34949 423 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 RAB8AP61006 207 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 ZNF155Q12901 538 aaPredicted RBP15.23■□□□□ 0.03
LTBR-201ENST00000228918 FGL2Q14314 439 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 KRT33BQ14525 404 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 TMEM44Q2T9K0 475 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 RRM2BQ7LG56 351 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 ARIH2OSQ8N7S6 290 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 ATP6V1C2Q8NEY4 427 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 OR4F15Q8NGB8 312 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 SLC7A6Q92536 515 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 OSTF1Q92882 214 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 SMARCD2Q92925 531 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 GIMAP5Q96F15 307 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 DEPDC7Q96QD5 511 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 DCLRE1CQ96SD1 692 aaKnown RBP15.23■□□□□ 0.03
LTBR-201ENST00000228918 PHPT1Q9NRX4 125 aaPredicted RBP15.23■□□□□ 0.03
LTBR-201ENST00000228918 IL20Q9NYY1 176 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 SERGEFQ9UGK8 458 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 NTNG1Q9Y2I2 539 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 C2orf16Q68DN1 1984 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 A0A0B4J293 547 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 PRR19A6NJB7 356 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 CENPXA8MT69 81 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 CASKO14936 926 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 KLF4O43474 513 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 PROM1O43490 865 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 IFNA8P32881 189 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 STAT5AP42229 794 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 TSFMP43897 325 aaKnown RBP15.23■□□□□ 0.03
LTBR-201ENST00000228918 HOXC5Q00444 222 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 MADCAM1Q13477 382 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 DSG2Q14126 1118 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 PDGFRLQ15198 375 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 CST6Q15828 149 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 DECR1Q16698 335 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.23■□□□□ 0.03
LTBR-201ENST00000228918 C16orf62Q7Z3J2 963 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 CLIP3Q96DZ5 547 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 RNF31Q96EP0 1072 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 ZNF649Q9BS31 505 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 COMMD3Q9UBI1 195 aa15.23■□□□□ 0.03
LTBR-201ENST00000228918 NDRG2Q9UN36 371 aaKnown RBP15.23■□□□□ 0.03
LTBR-201ENST00000228918 TMA7Q9Y2S6 64 aaKnown RBP15.23■□□□□ 0.03
LTBR-201ENST00000228918 PAK4O96013 591 aaPredicted RBP15.22■□□□□ 0.03
LTBR-201ENST00000228918 IGHA1P01876 353 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 HLA-DQB1P01920 261 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 THY1P04216 161 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 GAAP10253 952 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 MYL9P24844 172 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 KIR2DL3P43628 341 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 GPR4P46093 362 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 RGS8P57771 180 aaPredicted RBP15.22■□□□□ 0.03
LTBR-201ENST00000228918 MRPS15P82914 257 aaKnown RBP15.22■□□□□ 0.03
LTBR-201ENST00000228918 LTB4RQ15722 352 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 PGGHGQ32M88 737 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 C6orf132Q5T0Z8 1188 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 LCN1P1Q5VSP4 162 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 PLEKHM3Q6ZWE6 761 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 TMEM145Q8NBT3 493 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 SRFBP1Q8NEF9 429 aaKnown RBP15.22■□□□□ 0.03
LTBR-201ENST00000228918 KAT2AQ92830 837 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 COQ7Q99807 217 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 SOSTQ9BQB4 213 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 ACTRT3Q9BYD9 372 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 BTBD1Q9H0C5 482 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 RNF121Q9H920 327 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 MED17Q9NVC6 651 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 KLHL28Q9NXS3 571 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 SPHK1Q9NYA1 384 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 ZFR2Q9UPR6 939 aaKnown RBP15.22■□□□□ 0.03
LTBR-201ENST00000228918 EXOGQ9Y2C4 368 aaKnown RBP15.22■□□□□ 0.03
LTBR-201ENST00000228918 C5orf42Q9H799 3197 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 AKAP8O43823 692 aaKnown RBP15.22■□□□□ 0.03
LTBR-201ENST00000228918 HCN1O60741 890 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 APEX1P27695 318 aaKnown RBP15.22■□□□□ 0.03
LTBR-201ENST00000228918 PDX1P52945 283 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 ACSM1Q08AH1 577 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 CCDC58Q4VC31 144 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 CNIH2Q6PI25 160 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 ZNF620Q6ZNG0 422 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 NRMQ8IXM6 262 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 MFSD9Q8NBP5 474 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 PRKAG2Q9UGJ0 569 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 ZNF780BQ9Y6R6 833 aa15.22■□□□□ 0.03
LTBR-201ENST00000228918 SHISA3A0PJX4 238 aa15.21■□□□□ 0.03
LTBR-201ENST00000228918 PIP5K1CO60331 668 aa15.21■□□□□ 0.03
LTBR-201ENST00000228918 FCMRO60667 390 aa15.21■□□□□ 0.03
LTBR-201ENST00000228918 CSF2P04141 144 aa15.21■□□□□ 0.03
LTBR-201ENST00000228918 CEACAM5P06731 702 aa15.21■□□□□ 0.03
LTBR-201ENST00000228918 WASP42768 502 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms