RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 SYNPO2LQ9H987 977 aa12.29□□□□□ -0.44
PLOD3-201ENST00000223127 TEX10Q9NXF1 929 aaPredicted RBP12.29□□□□□ -0.44
PLOD3-201ENST00000223127 MAT2BQ9NZL9 334 aa12.29□□□□□ -0.44
PLOD3-201ENST00000223127 SNX11Q9Y5W9 270 aa12.29□□□□□ -0.44
PLOD3-201ENST00000223127 SHOXO15266 292 aa12.29□□□□□ -0.44
PLOD3-201ENST00000223127 PRKRAO75569 313 aaKnown RBP12.29□□□□□ -0.44
PLOD3-201ENST00000223127 FAM157BP0CG42 384 aa12.29□□□□□ -0.44
PLOD3-201ENST00000223127 M6PRP20645 277 aa12.29□□□□□ -0.44
PLOD3-201ENST00000223127 SSR2P43308 183 aa12.29□□□□□ -0.44
PLOD3-201ENST00000223127 AP2S1P53680 142 aaPredicted RBP12.29□□□□□ -0.44
PLOD3-201ENST00000223127 PDE7AQ13946 482 aa12.29□□□□□ -0.44
PLOD3-201ENST00000223127 TMEM201Q5SNT2 666 aa12.29□□□□□ -0.44
PLOD3-201ENST00000223127 GCNT6Q5T4J0 391 aa12.29□□□□□ -0.44
PLOD3-201ENST00000223127 DDI2Q5TDH0 399 aa12.29□□□□□ -0.44
PLOD3-201ENST00000223127 MEDAGQ5VYS4 303 aa12.29□□□□□ -0.44
PLOD3-201ENST00000223127 C22orf42Q6IC83 251 aa12.29□□□□□ -0.44
PLOD3-201ENST00000223127 ZNF770Q6IQ21 691 aaPredicted RBP12.29□□□□□ -0.44
PLOD3-201ENST00000223127 CREB3L2Q70SY1 520 aa12.29□□□□□ -0.44
PLOD3-201ENST00000223127 BCDIN3DQ7Z5W3 292 aaKnown RBP12.29□□□□□ -0.44
PLOD3-201ENST00000223127 NANOGP1Q8N7R0 232 aa12.29□□□□□ -0.44
PLOD3-201ENST00000223127 EXOSC8Q96B26 276 aaKnown RBP12.29□□□□□ -0.44
PLOD3-201ENST00000223127 RGMAQ96B86 450 aa12.29□□□□□ -0.44
PLOD3-201ENST00000223127 TM4SF18Q96CE8 201 aa12.29□□□□□ -0.44
PLOD3-201ENST00000223127 HDHD5Q9BXW7 423 aa12.29□□□□□ -0.44
PLOD3-201ENST00000223127 SRMSQ9H3Y6 488 aa12.29□□□□□ -0.44
PLOD3-201ENST00000223127 USP36Q9P275 1121 aaKnown RBP12.29□□□□□ -0.44
PLOD3-201ENST00000223127 ENOPH1Q9UHY7 261 aa12.29□□□□□ -0.44
PLOD3-201ENST00000223127 GLOD5A6NK44 160 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 SOX1O00570 391 aaPredicted RBP12.28□□□□□ -0.44
PLOD3-201ENST00000223127 GPR37L1O60883 481 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 SOX14O95416 240 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 HLA-DQB1P01920 261 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 CELA2BP08218 269 aaPredicted RBP12.28□□□□□ -0.44
PLOD3-201ENST00000223127 IGFBP1P08833 259 aaPredicted RBP12.28□□□□□ -0.44
PLOD3-201ENST00000223127 CHRM5P08912 532 aaPredicted RBP12.28□□□□□ -0.44
PLOD3-201ENST00000223127 PSKH1P11801 424 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 CHI3L1P36222 383 aaPredicted RBP12.28□□□□□ -0.44
PLOD3-201ENST00000223127 GAS6Q14393 721 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 UBXN2BQ14CS0 331 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 DGLUCYQ7Z3D6 616 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 UBE3DQ7Z6J8 389 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 GLRX5Q86SX6 157 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 NUDT13Q86X67 352 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 SYT14Q8NB59 555 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 OR4M2Q8NGB6 313 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 ZC3HAV1LQ96H79 300 aaKnown RBP12.28□□□□□ -0.44
PLOD3-201ENST00000223127 TEFMQ96QE5 360 aaKnown RBP12.28□□□□□ -0.44
PLOD3-201ENST00000223127 NELL2Q99435 816 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 GTPBP2Q9BX10 602 aaKnown RBP12.28□□□□□ -0.44
PLOD3-201ENST00000223127 AICDAQ9GZX7 198 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 MCUBQ9NWR8 336 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 ZNF282Q9UDV7 671 aaPredicted RBP12.28□□□□□ -0.44
PLOD3-201ENST00000223127 SLC23A1Q9UHI7 598 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 YARS2Q9Y2Z4 477 aaKnown RBP12.28□□□□□ -0.44
PLOD3-201ENST00000223127 HSPB11Q9Y547 144 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 HEBP2Q9Y5Z4 205 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 CLCA3PQ9Y6N3 262 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 ARHGEF17Q96PE2 2063 aaPredicted RBP12.28□□□□□ -0.44
PLOD3-201ENST00000223127 SPEGQ15772 3267 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 LAMA1P25391 3075 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 LRIT2A6NDA9 550 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 B8ZZF3 427 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 ERI3O43414 337 aaKnown RBP12.28□□□□□ -0.44
PLOD3-201ENST00000223127 HOXC4P09017 264 aaPredicted RBP12.28□□□□□ -0.44
PLOD3-201ENST00000223127 GLULP15104 373 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 APEX1P27695 318 aaKnown RBP12.28□□□□□ -0.44
PLOD3-201ENST00000223127 PTGER1P34995 402 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 MAN2A2P49641 1150 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 HMGA2P52926 109 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 RAB8AP61006 207 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 C1orf61Q13536 156 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 FLYWCH1Q4VC44 716 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 ESCO2Q56NI9 601 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 PRRT3Q5FWE3 981 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.28□□□□□ -0.44
PLOD3-201ENST00000223127 ZBED6CLQ96FA7 236 aaPredicted RBP12.28□□□□□ -0.44
PLOD3-201ENST00000223127 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.28□□□□□ -0.44
PLOD3-201ENST00000223127 KIR3DX1Q9H7L2 352 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 B3GAT2Q9NPZ5 323 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 DIABLOQ9NR28 239 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 KLF15Q9UIH9 416 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 PLXND1Q9Y4D7 1925 aa12.28□□□□□ -0.44
PLOD3-201ENST00000223127 ARRDC5A6NEK1 342 aa12.27□□□□□ -0.44
PLOD3-201ENST00000223127 PRICKLE3O43900 615 aaPredicted RBP12.27□□□□□ -0.44
PLOD3-201ENST00000223127 PDE9AO76083 593 aa12.27□□□□□ -0.44
PLOD3-201ENST00000223127 F3P13726 295 aa12.27□□□□□ -0.44
PLOD3-201ENST00000223127 SNRPGP62308 76 aaKnown RBP12.27□□□□□ -0.44
PLOD3-201ENST00000223127 EEF1A2Q05639 463 aaKnown RBP12.27□□□□□ -0.44
PLOD3-201ENST00000223127 ILF3Q12906 894 aaKnown RBP eCLIP12.27□□□□□ -0.44
PLOD3-201ENST00000223127 HSPB3Q12988 150 aa12.27□□□□□ -0.44
PLOD3-201ENST00000223127 SLC5A12Q1EHB4 618 aa12.27□□□□□ -0.44
PLOD3-201ENST00000223127 ZNF628Q5EBL2 1059 aa12.27□□□□□ -0.44
PLOD3-201ENST00000223127 ZNF761Q86XN6 746 aaPredicted RBP12.27□□□□□ -0.44
PLOD3-201ENST00000223127 NRROSQ86YC3 692 aa12.27□□□□□ -0.44
PLOD3-201ENST00000223127 TSTD1Q8NFU3 115 aa12.27□□□□□ -0.44
PLOD3-201ENST00000223127 OR8K5Q8NH50 307 aa12.27□□□□□ -0.44
PLOD3-201ENST00000223127 TMEM203Q969S6 136 aa12.27□□□□□ -0.44
PLOD3-201ENST00000223127 SLAMF7Q9NQ25 335 aa12.27□□□□□ -0.44
PLOD3-201ENST00000223127 TEKT2Q9UIF3 430 aa12.27□□□□□ -0.44
PLOD3-201ENST00000223127 TMCC3Q9ULS5 477 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms