RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 NFKBIDQ8NI38 313 aa25.1■■□□□ 1.61
CHMP4B-201ENST00000217402 SPACA9Q96E40 222 aaPredicted RBP25.1■■□□□ 1.61
CHMP4B-201ENST00000217402 TMEM19Q96HH6 336 aa25.1■■□□□ 1.61
CHMP4B-201ENST00000217402 SDF2Q99470 211 aa25.1■■□□□ 1.61
CHMP4B-201ENST00000217402 BTBD10Q9BSF8 475 aa25.1■■□□□ 1.61
CHMP4B-201ENST00000217402 ALG2Q9H553 416 aa25.1■■□□□ 1.61
CHMP4B-201ENST00000217402 PRORYQ9H606 182 aa25.1■■□□□ 1.61
CHMP4B-201ENST00000217402 MRTO4Q9UKD2 239 aaKnown RBP25.1■■□□□ 1.61
CHMP4B-201ENST00000217402 LIPT1Q9Y234 373 aa25.1■■□□□ 1.61
CHMP4B-201ENST00000217402 AP3M1Q9Y2T2 418 aa25.1■■□□□ 1.61
CHMP4B-201ENST00000217402 H6PDO95479 791 aa25.09■■□□□ 1.61
CHMP4B-201ENST00000217402 WDPCPO95876 746 aa25.09■■□□□ 1.61
CHMP4B-201ENST00000217402 FBXO45P0C2W1 286 aa25.09■■□□□ 1.61
CHMP4B-201ENST00000217402 ARAFP10398 606 aa25.09■■□□□ 1.61
CHMP4B-201ENST00000217402 TMED10P49755 219 aaKnown RBP25.09■■□□□ 1.61
CHMP4B-201ENST00000217402 GSK3BP49841 420 aa25.09■■□□□ 1.61
CHMP4B-201ENST00000217402 RASSF2P50749 326 aa25.09■■□□□ 1.61
CHMP4B-201ENST00000217402 NCALDP61601 193 aa25.09■■□□□ 1.61
CHMP4B-201ENST00000217402 OC90Q02509 493 aaPredicted RBP25.09■■□□□ 1.61
CHMP4B-201ENST00000217402 MAPK11Q15759 364 aa25.09■■□□□ 1.61
CHMP4B-201ENST00000217402 NET1Q7Z628 596 aaPredicted RBP25.09■■□□□ 1.61
CHMP4B-201ENST00000217402 FAM13CQ8NE31 585 aa25.09■■□□□ 1.61
CHMP4B-201ENST00000217402 OR2T12Q8NG77 320 aa25.09■■□□□ 1.61
CHMP4B-201ENST00000217402 DIO2Q92813 273 aa25.09■■□□□ 1.61
CHMP4B-201ENST00000217402 TMEM38AQ9H6F2 299 aa25.09■■□□□ 1.61
CHMP4B-201ENST00000217402 TSPAN2O60636 221 aa25.08■■□□□ 1.61
CHMP4B-201ENST00000217402 IL33O95760 270 aa25.08■■□□□ 1.61
CHMP4B-201ENST00000217402 CHRM4P08173 479 aa25.08■■□□□ 1.61
CHMP4B-201ENST00000217402 ATP6V1C1P21283 382 aa25.08■■□□□ 1.61
CHMP4B-201ENST00000217402 EEFSECP57772 596 aaKnown RBP25.08■■□□□ 1.61
CHMP4B-201ENST00000217402 ST3GAL2Q16842 350 aa25.08■■□□□ 1.61
CHMP4B-201ENST00000217402 DNAL1Q4LDG9 190 aa25.08■■□□□ 1.61
CHMP4B-201ENST00000217402 RPS26P11Q5JNZ5 115 aaPredicted RBP25.08■■□□□ 1.61
CHMP4B-201ENST00000217402 C11orf65Q8NCR3 313 aa25.08■■□□□ 1.61
CHMP4B-201ENST00000217402 FAM110BQ8TC76 370 aa25.08■■□□□ 1.61
CHMP4B-201ENST00000217402 REXO5Q96IC2 774 aaKnown RBP25.08■■□□□ 1.61
CHMP4B-201ENST00000217402 COL21A1Q96P44 957 aa25.08■■□□□ 1.61
CHMP4B-201ENST00000217402 TRNT1Q96Q11 434 aaKnown RBP25.08■■□□□ 1.61
CHMP4B-201ENST00000217402 G6PC3Q9BUM1 346 aa25.08■■□□□ 1.61
CHMP4B-201ENST00000217402 HPF1Q9NWY4 346 aa25.08■■□□□ 1.61
CHMP4B-201ENST00000217402 CPAMD8Q8IZJ3 1885 aa25.08■■□□□ 1.61
CHMP4B-201ENST00000217402 PRORSD1PA6NEY8 169 aa25.08■■□□□ 1.6
CHMP4B-201ENST00000217402 FAM220BPB1ANY3 271 aa25.08■■□□□ 1.6
CHMP4B-201ENST00000217402 C5orf58C9J3I9 102 aa25.08■■□□□ 1.6
CHMP4B-201ENST00000217402 MKRN2OSH3BPM6 223 aa25.08■■□□□ 1.6
CHMP4B-201ENST00000217402 FCMRO60667 390 aa25.08■■□□□ 1.6
CHMP4B-201ENST00000217402 UGT2B11O75310 529 aa25.08■■□□□ 1.6
CHMP4B-201ENST00000217402 CASRP41180 1078 aa25.08■■□□□ 1.6
CHMP4B-201ENST00000217402 PSMD4P55036 377 aaKnown RBP25.08■■□□□ 1.6
CHMP4B-201ENST00000217402 CDK6Q00534 326 aa25.08■■□□□ 1.6
CHMP4B-201ENST00000217402 SCARB2Q14108 478 aa25.08■■□□□ 1.6
CHMP4B-201ENST00000217402 ZNF791Q3KP31 576 aaPredicted RBP25.08■■□□□ 1.6
CHMP4B-201ENST00000217402 FAM156AQ8NDB6 213 aa25.08■■□□□ 1.6
CHMP4B-201ENST00000217402 KCTD14Q9BQ13 255 aaPredicted RBP25.08■■□□□ 1.6
CHMP4B-201ENST00000217402 UTP23Q9BRU9 249 aaKnown RBP25.08■■□□□ 1.6
CHMP4B-201ENST00000217402 SPATA9Q9BWV2 254 aa25.08■■□□□ 1.6
CHMP4B-201ENST00000217402 ZNF350Q9GZX5 532 aa25.08■■□□□ 1.6
CHMP4B-201ENST00000217402 RUBCNLQ9H714 662 aa25.08■■□□□ 1.6
CHMP4B-201ENST00000217402 MKLN1Q9UL63 735 aa25.08■■□□□ 1.6
CHMP4B-201ENST00000217402 PCDHGA9Q9Y5G4 932 aaKnown RBP25.08■■□□□ 1.6
CHMP4B-201ENST00000217402 STX11O75558 287 aa25.07■■□□□ 1.6
CHMP4B-201ENST00000217402 ZIC2O95409 532 aaPredicted RBP25.07■■□□□ 1.6
CHMP4B-201ENST00000217402 NAGAP17050 411 aa25.07■■□□□ 1.6
CHMP4B-201ENST00000217402 TCN1P20061 433 aaPredicted RBP25.07■■□□□ 1.6
CHMP4B-201ENST00000217402 CYB561P49447 251 aa25.07■■□□□ 1.6
CHMP4B-201ENST00000217402 HLCSP50747 726 aa25.07■■□□□ 1.6
CHMP4B-201ENST00000217402 TUBA3CQ13748 450 aa25.07■■□□□ 1.6
CHMP4B-201ENST00000217402 ZSCAN26Q16670 478 aa25.07■■□□□ 1.6
CHMP4B-201ENST00000217402 CPEB4Q17RY0 729 aaKnown RBP eCLIP25.07■■□□□ 1.6
CHMP4B-201ENST00000217402 ZNF630Q2M218 657 aaPredicted RBP25.07■■□□□ 1.6
CHMP4B-201ENST00000217402 COL28A1Q2UY09 1125 aa25.07■■□□□ 1.6
CHMP4B-201ENST00000217402 SAMD4BQ5PRF9 694 aaKnown RBP25.07■■□□□ 1.6
CHMP4B-201ENST00000217402 TUBA3EQ6PEY2 450 aa25.07■■□□□ 1.6
CHMP4B-201ENST00000217402 CYP4Z2PQ8N1L4 340 aa25.07■■□□□ 1.6
CHMP4B-201ENST00000217402 OR10G3Q8NGC4 313 aa25.07■■□□□ 1.6
CHMP4B-201ENST00000217402 SMAD5Q99717 465 aaKnown RBP25.07■■□□□ 1.6
CHMP4B-201ENST00000217402 THTPAQ9BU02 230 aa25.07■■□□□ 1.6
CHMP4B-201ENST00000217402 WDR45Q9Y484 360 aa25.07■■□□□ 1.6
CHMP4B-201ENST00000217402 DSPP15924 2871 aaKnown RBP25.07■■□□□ 1.6
CHMP4B-201ENST00000217402 NPIPA5A0A0B4J1W7 369 aa25.06■■□□□ 1.6
CHMP4B-201ENST00000217402 OR6C70A6NIJ9 312 aa25.06■■□□□ 1.6
CHMP4B-201ENST00000217402 NPIPA7E9PJI5 369 aa25.06■■□□□ 1.6
CHMP4B-201ENST00000217402 NPIPA8P0DM63 369 aa25.06■■□□□ 1.6
CHMP4B-201ENST00000217402 CYP4B1P13584 511 aa25.06■■□□□ 1.6
CHMP4B-201ENST00000217402 CRISP3P54108 245 aa25.06■■□□□ 1.6
CHMP4B-201ENST00000217402 CHRNEQ04844 493 aa25.06■■□□□ 1.6
CHMP4B-201ENST00000217402 GNA13Q14344 377 aa25.06■■□□□ 1.6
CHMP4B-201ENST00000217402 GPR68Q15743 365 aa25.06■■□□□ 1.6
CHMP4B-201ENST00000217402 NTRK2Q16620 822 aa25.06■■□□□ 1.6
CHMP4B-201ENST00000217402 VMACQ2NL98 169 aa25.06■■□□□ 1.6
CHMP4B-201ENST00000217402 FLYWCH1Q4VC44 716 aa25.06■■□□□ 1.6
CHMP4B-201ENST00000217402 CLPTM1LQ96KA5 538 aa25.06■■□□□ 1.6
CHMP4B-201ENST00000217402 ARHGAP9Q9BRR9 750 aa25.06■■□□□ 1.6
CHMP4B-201ENST00000217402 FLRT3Q9NZU0 649 aa25.06■■□□□ 1.6
CHMP4B-201ENST00000217402 ICOSLGO75144 302 aa25.05■■□□□ 1.6
CHMP4B-201ENST00000217402 PDE5AO76074 875 aa25.05■■□□□ 1.6
CHMP4B-201ENST00000217402 AQP1P29972 269 aa25.05■■□□□ 1.6
CHMP4B-201ENST00000217402 CD96P40200 585 aa25.05■■□□□ 1.6
CHMP4B-201ENST00000217402 PNLIPRP2P54317 469 aa25.05■■□□□ 1.6
CHMP4B-201ENST00000217402 ARG2P78540 354 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms