RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Ddx28Q9CWT6 540 aaKnown RBP16.78■□□□□ 0.28
Ptpra-201ENSMUST00000028769 4933421I07RikQ9D420 214 aa16.78■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Cbll1Q9JIY2 491 aa16.78■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Eif4hQ9WUK2 248 aaKnown RBP16.78■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Arid1aA2BH40 2283 aaKnown RBP16.78■□□□□ 0.28
Ptpra-201ENSMUST00000028769 SptbP15508 2128 aa16.78■□□□□ 0.28
Ptpra-201ENSMUST00000028769 BC025446A0A087WQT1 134 aa16.78■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Tcrg-V3A0A0G2JEW2 117 aa16.78■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Tmprss11cQ1JRP2 431 aa16.78■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Ddx5Q61656 614 aaKnown RBP16.78■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Unc119bQ8C4B4 251 aa16.78■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Tmem200aQ8C817 491 aa16.78■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Ttc23Q8CHY7 488 aa16.78■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Unc5dQ8K1S2 956 aa16.78■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Pskh1Q91YA2 424 aa16.78■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Lypd2Q9DD23 127 aa16.78■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Rtp4Q9ER80 249 aaKnown RBP16.78■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Scn2aA0A0J9YTW6 2006 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Wdr76A6PWY4 622 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Vmn1r58G3X9U3 310 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Gm3755K7N743 167 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Smpd2O70572 419 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Csn1s1P19228 313 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Trim45Q6PFY8 580 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Olfr1231Q7TQZ8 313 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Fam205cQ80YD3 371 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Zc3hc1Q80YV2 501 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Fam69cQ8BQT2 410 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Pqlc3Q8C6U2 202 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Dcun1d3Q8K0V2 304 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Spns1Q8R0G7 528 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Slc9a8Q8R4D1 576 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Cd276Q8VE98 316 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Olfr54Q8VFE6 313 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Lims1Q99JW4 325 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Pop7Q9DCH2 140 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Tsc22d3Q9Z2S7 137 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 MylkQ6PDN3 1941 aaKnown RBP16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Olfr1032A2ATE5 310 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Gm3149E9PW52 257 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Itga10E9Q6R1 1167 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Gm8362K7N6Y6 257 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Nmur1O55040 428 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 AurkcO88445 282 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Efna1P52793 205 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Bcl2a1Q07440 172 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Meig1Q61845 88 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 VclQ64727 1066 aaKnown RBP16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Trim46Q7TNM2 759 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Slc5a8Q8BYF6 611 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 EloaQ8CB77 773 aaKnown RBP16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Ankrd10Q99LW0 415 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Lpar2Q9JL06 348 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Col12a1Q60847 3120 aa16.77■□□□□ 0.28
Ptpra-201ENSMUST00000028769 Il17dA0A0B4J1G4 205 aa16.77■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Zfp472B0V2W5 534 aa16.77■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Olfr544E9PX47 334 aa16.77■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Lrrc31F6VYM1 502 aa16.77■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Rpl3P27659 403 aaKnown RBP16.77■□□□□ 0.27
Ptpra-201ENSMUST00000028769 KapP61110 121 aa16.77■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Tas2r110Q7M712 333 aa16.77■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Tas2r104Q7M723 302 aa16.77■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Mgat4bQ812F8 548 aa16.77■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Ptges2Q8BWM0 384 aa16.77■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Fate1Q8CEK7 99 aa16.77■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Gm42417Q8K1D0 126 aa16.77■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Coq9Q8K1Z0 313 aa16.77■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Paip1Q8VE62 400 aa16.77■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Olfr1020Q8VFK7 317 aa16.77■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Cd209dQ91ZW8 237 aa16.77■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Olfr103Q920Y8 313 aa16.77■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Tssk6Q925K9 273 aa16.77■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Prdm9Q96EQ9 843 aa16.77■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Lrrc69Q9D9Q0 347 aa16.77■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Fzd2Q9JIP6 570 aa16.77■□□□□ 0.27
Ptpra-201ENSMUST00000028769 NsdhlQ9R1J0 362 aa16.77■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Vmn2r52L7N2B2 852 aa16.76■□□□□ 0.27
Ptpra-201ENSMUST00000028769 IlkO55222 452 aa16.76■□□□□ 0.27
Ptpra-201ENSMUST00000028769 DctP29812 517 aa16.76■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Rpl6P47911 296 aaKnown RBP16.76■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Ube2e3P52483 207 aa16.76■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Gnb5P62881 395 aa16.76■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Olfr699Q7TRN3 316 aa16.76■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Adam29Q811Q4 763 aa16.76■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Znf786Q8BV42 777 aa16.76■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Klhl31Q8BWA5 634 aa16.76■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Tgm4Q8BZH1 670 aa16.76■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Clrn1Q8K445 232 aa16.76■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Olfr700Q8VFM5 316 aa16.76■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Elovl4Q9EQC4 312 aa16.76■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Tbl2Q9R099 442 aaKnown RBP16.76■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Heatr5bQ8C547 2070 aa16.76■□□□□ 0.27
Ptpra-201ENSMUST00000028769 SpaarA0A1B0GSZ0 75 aa16.76■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Olfr1366A0A1W2P740 328 aa16.76■□□□□ 0.27
Ptpra-201ENSMUST00000028769 1700023F06RikA2AB62 382 aa16.76■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Rhox2fA2ANE0 191 aa16.76■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Zfp54E9PW05 585 aa16.76■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Tgfb1P04202 390 aa16.76■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Apoc2Q05020 97 aa16.76■□□□□ 0.27
Ptpra-201ENSMUST00000028769 Dcp1bQ3U564 578 aa16.76■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms