RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 USP34Q70CQ2 3546 aa8.27□□□□□ -1.09
PHGDH-219ENST00000641513 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 A0A1B0GX78 115 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 OR2W5A6NFC9 320 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 A8MUA0 341 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 ADAMDEC1O15204 470 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 SLC22A1O15245 554 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 COQ9O75208 318 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 SLITRK5O94991 958 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 GABARAPO95166 117 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 ATE1O95260 518 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 AGR2O95994 175 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 ALPPP05187 535 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 HTR1AP08908 422 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 CT62P0C5K7 136 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 ANKRD34CP0C6C1 535 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 ZNF883P0CG24 379 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 ACP2P11117 423 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 ITGA2P17301 1181 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 MAOAP21397 527 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 PCMT1P22061 227 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 EEF1B2P24534 225 aaKnown RBP8.26□□□□□ -1.09
PHGDH-219ENST00000641513 ELK4P28324 431 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 CSTF2P33240 577 aaKnown RBP eCLIP8.26□□□□□ -1.09
PHGDH-219ENST00000641513 PIGAP37287 484 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 YAP1P46937 504 aaKnown RBP8.26□□□□□ -1.09
PHGDH-219ENST00000641513 OR1E2P47887 323 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 PGDP52209 483 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 CRYBA2P53672 197 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 MAPK10P53779 464 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 IST1P53990 364 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 HSD17B7P56937 341 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 PCBP3P57721 371 aaKnown RBP8.26□□□□□ -1.09
PHGDH-219ENST00000641513 SLC35A2P78381 396 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 KCNJ10P78508 379 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 VLDLRP98155 873 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 SPIBQ01892 262 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 CDK5R2Q13319 367 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 ZNF267Q14586 743 aaPredicted RBP8.26□□□□□ -1.09
PHGDH-219ENST00000641513 NEDD8Q15843 81 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 PRICKLE4Q2TBC4 344 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 CTU2Q2VPK5 515 aaKnown RBP8.26□□□□□ -1.09
PHGDH-219ENST00000641513 IQCCQ4KMZ1 466 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 GPR107Q5VW38 600 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 LAIR1Q6GTX8 287 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 LAIR2Q6ISS4 152 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 MFSD12Q6NUT3 480 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 DGAT2L6Q6ZPD8 337 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 GALNT12Q8IXK2 581 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 PRSS58Q8IYP2 241 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 LGI4Q8N135 537 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 OR2L13Q8N349 312 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 VWA5B2Q8N398 1253 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 SIMC1Q8NDZ2 872 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 OR52R1Q8NGF1 315 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 VANGL1Q8TAA9 524 aaPredicted RBP8.26□□□□□ -1.09
PHGDH-219ENST00000641513 TBC1D15Q8TC07 691 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 MIPOL1Q8TD10 442 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 ZNF675Q8TD23 568 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 GPR151Q8TDV0 419 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 TRUB1Q8WWH5 349 aaKnown RBP8.26□□□□□ -1.09
PHGDH-219ENST00000641513 RASSF5Q8WWW0 418 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 GEMIN6Q8WXD5 167 aaKnown RBP8.26□□□□□ -1.09
PHGDH-219ENST00000641513 FKBP10Q96AY3 582 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 MVB12AQ96EY5 273 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 GIMAP5Q96F15 307 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 SLC35A4Q96G79 324 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 C7orf34Q96L11 122 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 SIGLEC11Q96RL6 698 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 TREX2Q9BQ50 279 aaPredicted RBP8.26□□□□□ -1.09
PHGDH-219ENST00000641513 TRIM45Q9H8W5 580 aaPredicted RBP8.26□□□□□ -1.09
PHGDH-219ENST00000641513 REEP1Q9H902 201 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 SMURF2Q9HAU4 748 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 PNO1Q9NRX1 252 aaKnown RBP8.26□□□□□ -1.09
PHGDH-219ENST00000641513 PLCXD1Q9NUJ7 323 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 SCN3BQ9NY72 215 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 CALML5Q9NZT1 146 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 SLC13A4Q9UKG4 626 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 C19orf53Q9UNZ5 99 aaPredicted RBP8.26□□□□□ -1.09
PHGDH-219ENST00000641513 SRPK3Q9UPE1 567 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 LIPT1Q9Y234 373 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 SH3GLB1Q9Y371 365 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 SAMHD1Q9Y3Z3 626 aaKnown RBP8.26□□□□□ -1.09
PHGDH-219ENST00000641513 FAM32AQ9Y421 112 aaKnown RBP8.26□□□□□ -1.09
PHGDH-219ENST00000641513 PCDHGB3Q9Y5G1 929 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 KCNE3Q9Y6H6 103 aa8.26□□□□□ -1.09
PHGDH-219ENST00000641513 A0A087WV62 115 aa8.25□□□□□ -1.09
PHGDH-219ENST00000641513 A0A0G2JPF8 293 aa8.25□□□□□ -1.09
PHGDH-219ENST00000641513 LNP1A1A4G5 178 aa8.25□□□□□ -1.09
PHGDH-219ENST00000641513 PRAMEF27A3QJZ7 478 aa8.25□□□□□ -1.09
PHGDH-219ENST00000641513 EFCAB7A8K855 629 aa8.25□□□□□ -1.09
PHGDH-219ENST00000641513 ZNF99A8MXY4 864 aaPredicted RBP8.25□□□□□ -1.09
PHGDH-219ENST00000641513 HNRNPCL2B2RXH8 293 aa8.25□□□□□ -1.09
PHGDH-219ENST00000641513 HNRNPCL3B7ZW38 293 aa8.25□□□□□ -1.09
PHGDH-219ENST00000641513 D6RAR5 112 aa8.25□□□□□ -1.09
PHGDH-219ENST00000641513 H3BMH7 237 aa8.25□□□□□ -1.09
PHGDH-219ENST00000641513 TGFBR3LH3BV60 316 aa8.25□□□□□ -1.09
PHGDH-219ENST00000641513 FLRT2O43155 660 aa8.25□□□□□ -1.09
PHGDH-219ENST00000641513 ASNA1O43681 348 aa8.25□□□□□ -1.09
PHGDH-219ENST00000641513 HYAL3O43820 417 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms