RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 SLC35G3Q8N808 338 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 SUMF2Q8NBJ7 301 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 POGLUT1Q8NBL1 392 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 EXOC4Q96A65 974 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 BTBD9Q96Q07 612 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 ERGIC2Q96RQ1 377 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 DDOQ99489 341 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 NRIP2Q9BQI9 281 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 CHAC1Q9BUX1 264 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 SRXN1Q9BYN0 137 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 OR11A1Q9GZK7 315 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 C2orf40Q9H1Z8 148 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 PDCL3Q9H2J4 239 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 TECRQ9NZ01 308 aaKnown RBP-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 CDH10Q9Y6N8 788 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 PRRC2CQ9Y520 2896 aaKnown RBP-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 MED13Q9UHV7 2174 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 IGLV4-60A0A075B6I1 120 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 TRAV18A0A075B6X5 111 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 DFNA5O60443 496 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 BBOX1O75936 387 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 GSRP00390 522 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 KRT8P05787 483 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 PPIAL4GP0DN37 164 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 GOT1P17174 413 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 XBP1P17861 261 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 TBPP20226 339 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 CDH3P22223 829 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 GDF1P27539 372 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 SRIP30626 198 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 NNMTP40261 264 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 SGSHP51688 502 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 SNRPD1P62314 119 aaKnown RBP-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 MC1RQ01726 317 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 LY6EQ16553 131 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 AARDQ4LEZ3 155 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 ZNF658BQ4V348 819 aaPredicted RBP-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 C14orf28Q4W4Y0 310 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 CES4AQ5XG92 561 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 SMARCD3Q6STE5 483 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 Q6ZRN7 208 aaPredicted RBP-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 CALHM3Q86XJ0 350 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 ARRDC1Q8N5I2 433 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 ST20-AS1Q8NBB2 130 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 RHOXF1Q8NHV9 184 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 PCNPQ8WW12 178 aaKnown RBP-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 OR1E3Q8WZA6 343 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 KRT35Q92764 455 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 NXPE2Q96DL1 559 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 C16orf74Q96GX8 76 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 SLC39A8Q9C0K1 460 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 OR10A4Q9H209 315 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 KAT8Q9H7Z6 458 aaKnown RBP-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 ARMCX3Q9UH62 379 aaPredicted RBP-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 ERVK-19Q9WJR5 959 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 TNRC6BQ9UPQ9 1833 aaKnown RBP-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 CSMD1Q96PZ7 3565 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 ADAMTSL1Q8N6G6 1762 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 IGLV3-16A0A075B6K0 115 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 MCF2LO15068 1137 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 PHF1O43189 567 aaPredicted RBP-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 VEGFDO43915 354 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 TPST2O60704 377 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 HCN1O60741 890 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 SDC3O75056 442 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 CXCL14O95715 111 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 HPNP05981 417 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 DCNP07585 359 aaKnown RBP-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 CGB3P0DN86 165 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 UMPSP11172 480 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 SAA4P35542 130 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 RAD52P43351 418 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 ASMTP46597 345 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 PSMD8P48556 350 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 CLDN6P56747 220 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 ADARB1P78563 741 aaKnown RBP-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 DEFA6Q01524 100 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 MORF4L2Q15014 288 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 NDUFA9Q16795 377 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 GLYR1Q49A26 553 aaPredicted RBP-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 RFTN2Q52LD8 501 aaPredicted RBP-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 XKR7Q5GH72 579 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 TMEM211Q6ICI0 200 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 CCDC70Q6NSX1 233 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 ZNF544Q6NX49 715 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 FUT10Q6P4F1 479 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 SLC39A4Q6P5W5 647 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 FAM159AQ6UWV7 190 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 SIX6OS1Q8N1H7 587 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 POMGNT2Q8NAT1 580 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 TAF4BQ92750 862 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 HAVCR1Q96D42 359 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 ZBED6CLQ96FA7 236 aaPredicted RBP-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 FER1L6-AS2Q96M78 137 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 TESK2Q96S53 571 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 APOL6Q9BWW8 343 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 INTS10Q9NVR2 710 aaKnown RBP-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 NLGN3Q9NZ94 848 aa-0.22□□□□□ -2.44
CCDC7-215ENST00000639629 RIMS3Q9UJD0 308 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms