RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 GGTA1PQ4G0N0 100 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 KLHL26Q53HC5 615 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 AVL9Q8NBF6 648 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 TMIEQ8NEW7 156 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 ADAMTS16Q8TE57 1224 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 SLC38A5Q8WUX1 472 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 SAMD11Q96NU1 681 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 TEX10Q9NXF1 929 aaPredicted RBP13.62□□□□□ -0.23
SCARB2-216ENST00000639300 GDE1Q9NZC3 331 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 GMEB2Q9UKD1 530 aa13.62□□□□□ -0.23
SCARB2-216ENST00000639300 ZNF20P17024 532 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 MMP12P39900 470 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 WNT4P56705 351 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 CTBSQ01459 385 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 MCEMP1Q8IX19 187 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 TMEFF1Q8IYR6 380 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 OR4K17Q8NGC6 315 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 SLCO4A1Q96BD0 722 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 G6PC3Q9BUM1 346 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 TM7SF3Q9NS93 570 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 NINQ8N4C6 2090 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 SMIM18P0DKX4 95 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 VAMP1P23763 118 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 CHMP24386 653 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 QSOX2Q6ZRP7 698 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 DCDC5Q6ZRR9 648 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 GPAT4Q86UL3 456 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 SAP130Q9H0E3 1048 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 METTL7AQ9H8H3 244 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 MRPL15Q9P015 296 aaKnown RBP13.61□□□□□ -0.23
SCARB2-216ENST00000639300 FXYD6-FXYD2A0A087WZ82 144 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 RDH16O75452 317 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 ITGAMP11215 1152 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 IRS1P35568 1242 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 VRK2Q86Y07 508 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 GPALPP1Q8IXQ4 340 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 TMEM246Q9BRR3 403 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 FXYD6Q9H0Q3 95 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 IKZF5Q9H5V7 419 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 TAS2R16Q9NYV7 291 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 DKK3Q9UBP4 350 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 A0A0A6YYC8 382 aaPredicted RBP13.61□□□□□ -0.23
SCARB2-216ENST00000639300 TRBV4-1A0A0J9YWV2 114 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 I3L1I5 382 aaPredicted RBP13.61□□□□□ -0.23
SCARB2-216ENST00000639300 LDOC1O95751 146 aaPredicted RBP13.61□□□□□ -0.23
SCARB2-216ENST00000639300 PEX11BO96011 259 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 NPPBP16860 134 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 SMCO1Q147U7 214 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 TANGO2Q6ICL3 276 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 SLC25A25Q6KCM7 469 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 Q6ZSR6 202 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 NAXEQ8NCW5 288 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 OR6N1Q8NGY5 312 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 RLN3Q8WXF3 142 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 CDS1Q92903 461 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 C16orf58Q96GQ5 468 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 UPB1Q9UBR1 384 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 PPT2Q9UMR5 302 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 TRIP11Q15643 1979 aa13.61□□□□□ -0.23
SCARB2-216ENST00000639300 A0A1B0GVC2 190 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 A6NIN4 97 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 STOMP27105 288 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 AHRP35869 848 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 CHRNEQ04844 493 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 C1orf189Q5VU69 101 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 DNM1P34Q6PK57 102 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 B3GLCTQ6Y288 498 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 PAQR7Q86WK9 346 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 C12orf40Q86WS4 652 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 OR8S1Q8NH09 359 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 ZNF431Q8TF32 576 aaPredicted RBP13.6□□□□□ -0.23
SCARB2-216ENST00000639300 ZMYND19Q96E35 227 aaPredicted RBP13.6□□□□□ -0.23
SCARB2-216ENST00000639300 GTPBP2Q9BX10 602 aaKnown RBP13.6□□□□□ -0.23
SCARB2-216ENST00000639300 ZBP1Q9H171 429 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 CXorf36Q9H7Y0 433 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 PAQR5Q9NXK6 330 aaPredicted RBP13.6□□□□□ -0.23
SCARB2-216ENST00000639300 C5orf51A6NDU8 294 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 LRRN3E7EW58 273 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 K7ESM1 405 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 PPP1R3DO95685 299 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 GASTP01350 101 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 ACPPP15309 386 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 GPX2P18283 190 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 HSD11B1P28845 292 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 MAZP56270 477 aaKnown RBP13.6□□□□□ -0.23
SCARB2-216ENST00000639300 SNTB2Q13425 540 aaKnown RBP13.6□□□□□ -0.23
SCARB2-216ENST00000639300 TMPRSS12Q86WS5 348 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 HS6ST2Q96MM7 605 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 MS4A4EQ96PG1 132 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 RBP7Q96R05 134 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 LRRN3Q9H3W5 708 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 ACTR10Q9NZ32 417 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 ATXN7L1Q9ULK2 861 aaPredicted RBP13.6□□□□□ -0.23
SCARB2-216ENST00000639300 PRKRAO75569 313 aaKnown RBP13.6□□□□□ -0.23
SCARB2-216ENST00000639300 GYPBP06028 91 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 FURINP09958 794 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 PGAM2P15259 253 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 EXOSC7Q15024 291 aaKnown RBP13.6□□□□□ -0.23
SCARB2-216ENST00000639300 PIP5KL1Q5T9C9 394 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 OR2G6Q5TZ20 316 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms