RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 ZNF611Q8N823 705 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 SPRYD4Q8WW59 207 aaPredicted RBP17.54■□□□□ 0.4
SCARB2-213ENST00000638680 THAP7Q9BT49 309 aaPredicted RBP17.54■□□□□ 0.4
SCARB2-213ENST00000638680 MTHFD2LQ9H903 347 aaPredicted RBP17.54■□□□□ 0.4
SCARB2-213ENST00000638680 KLK3P07288 261 aaPredicted RBP17.53■□□□□ 0.4
SCARB2-213ENST00000638680 SIM1P81133 766 aaPredicted RBP17.53■□□□□ 0.4
SCARB2-213ENST00000638680 GORASP2Q9H8Y8 452 aa17.53■□□□□ 0.4
SCARB2-213ENST00000638680 MYEF2Q9P2K5 600 aaKnown RBP17.53■□□□□ 0.4
SCARB2-213ENST00000638680 BTNL2Q9UIR0 455 aa17.53■□□□□ 0.4
SCARB2-213ENST00000638680 AK6Q9Y3D8 172 aaKnown RBP17.53■□□□□ 0.4
SCARB2-213ENST00000638680 RPS17P08708 135 aaKnown RBP17.53■□□□□ 0.4
SCARB2-213ENST00000638680 ZNF84P51523 738 aa17.53■□□□□ 0.4
SCARB2-213ENST00000638680 SLC18B1Q6NT16 456 aa17.53■□□□□ 0.4
SCARB2-213ENST00000638680 RNF111Q6ZNA4 994 aa17.53■□□□□ 0.4
SCARB2-213ENST00000638680 PARP16Q8N5Y8 322 aa17.53■□□□□ 0.4
SCARB2-213ENST00000638680 THAP3Q8WTV1 239 aaPredicted RBP17.53■□□□□ 0.4
SCARB2-213ENST00000638680 RAB7BQ96AH8 199 aa17.53■□□□□ 0.4
SCARB2-213ENST00000638680 SYT11Q9BT88 431 aa17.53■□□□□ 0.4
SCARB2-213ENST00000638680 ACTRT3Q9BYD9 372 aa17.53■□□□□ 0.4
SCARB2-213ENST00000638680 MEPEQ9NQ76 525 aaPredicted RBP17.53■□□□□ 0.4
SCARB2-213ENST00000638680 MYH7P12883 1935 aa17.53■□□□□ 0.4
SCARB2-213ENST00000638680 SLC22A5O76082 557 aa17.53■□□□□ 0.4
SCARB2-213ENST00000638680 CRHBPP24387 322 aa17.53■□□□□ 0.4
SCARB2-213ENST00000638680 KCNJ5P48544 419 aa17.53■□□□□ 0.4
SCARB2-213ENST00000638680 CSNK1A1LQ8N752 337 aa17.53■□□□□ 0.4
SCARB2-213ENST00000638680 TCEAL3Q969E4 200 aa17.53■□□□□ 0.4
SCARB2-213ENST00000638680 OR5B12Q96R08 314 aa17.53■□□□□ 0.4
SCARB2-213ENST00000638680 HEMK1Q9Y5R4 338 aaPredicted RBP17.53■□□□□ 0.4
SCARB2-213ENST00000638680 B8ZZF3 427 aa17.53■□□□□ 0.4
SCARB2-213ENST00000638680 VEZF1Q14119 521 aa17.53■□□□□ 0.4
SCARB2-213ENST00000638680 NAA50Q9GZZ1 169 aaKnown RBP17.53■□□□□ 0.4
SCARB2-213ENST00000638680 IL37Q9NZH6 218 aa17.53■□□□□ 0.4
SCARB2-213ENST00000638680 GPR45Q9Y5Y3 372 aa17.53■□□□□ 0.4
SCARB2-213ENST00000638680 CSNK1G3Q9Y6M4 447 aa17.53■□□□□ 0.4
SCARB2-213ENST00000638680 AKAP12Q02952 1782 aa17.53■□□□□ 0.4
SCARB2-213ENST00000638680 NKPD1Q17RQ9 610 aa17.53■□□□□ 0.4
SCARB2-213ENST00000638680 SERPINA11Q86U17 422 aa17.53■□□□□ 0.4
SCARB2-213ENST00000638680 OR51J1Q9H342 316 aa17.53■□□□□ 0.4
SCARB2-213ENST00000638680 IGLON5A6NGN9 336 aa17.52■□□□□ 0.4
SCARB2-213ENST00000638680 HPGDSO60760 199 aa17.52■□□□□ 0.4
SCARB2-213ENST00000638680 IFNA1P01562 189 aa17.52■□□□□ 0.4
SCARB2-213ENST00000638680 C6P13671 934 aa17.52■□□□□ 0.4
SCARB2-213ENST00000638680 SDC1P18827 310 aa17.52■□□□□ 0.4
SCARB2-213ENST00000638680 PGCP20142 388 aa17.52■□□□□ 0.4
SCARB2-213ENST00000638680 AWAT2Q6E213 333 aa17.52■□□□□ 0.4
SCARB2-213ENST00000638680 MEX3DQ86XN8 651 aaKnown RBP17.52■□□□□ 0.4
SCARB2-213ENST00000638680 OR2T4Q8NH00 348 aa17.52■□□□□ 0.4
SCARB2-213ENST00000638680 IRS2Q9Y4H2 1338 aa17.52■□□□□ 0.4
SCARB2-213ENST00000638680 KCTD20Q7Z5Y7 419 aa17.52■□□□□ 0.4
SCARB2-213ENST00000638680 HOXB13Q92826 284 aaPredicted RBP17.52■□□□□ 0.4
SCARB2-213ENST00000638680 FAM171A2A8MVW0 826 aa17.52■□□□□ 0.4
SCARB2-213ENST00000638680 PPP6CO00743 305 aa17.52■□□□□ 0.4
SCARB2-213ENST00000638680 HOXA11P31270 313 aaPredicted RBP17.52■□□□□ 0.4
SCARB2-213ENST00000638680 ALDH3B2P48448 385 aa17.52■□□□□ 0.4
SCARB2-213ENST00000638680 GSTM4Q03013 218 aa17.52■□□□□ 0.4
SCARB2-213ENST00000638680 KIAA0319Q5VV43 1072 aa17.52■□□□□ 0.4
SCARB2-213ENST00000638680 KDELC1Q6UW63 502 aa17.52■□□□□ 0.4
SCARB2-213ENST00000638680 CREB3L4Q8TEY5 395 aa17.52■□□□□ 0.4
SCARB2-213ENST00000638680 PGAP3Q96FM1 320 aaPredicted RBP17.52■□□□□ 0.4
SCARB2-213ENST00000638680 CNTNAP3BQ96NU0 1288 aa17.52■□□□□ 0.4
SCARB2-213ENST00000638680 PHB2Q99623 299 aa17.52■□□□□ 0.4
SCARB2-213ENST00000638680 CLDND1Q9NY35 253 aa17.52■□□□□ 0.4
SCARB2-213ENST00000638680 MYH7BA7E2Y1 1941 aa17.52■□□□□ 0.39
SCARB2-213ENST00000638680 GRXCR2A6NFK2 248 aa17.52■□□□□ 0.39
SCARB2-213ENST00000638680 RNASET2O00584 256 aaKnown RBP17.52■□□□□ 0.39
SCARB2-213ENST00000638680 PRKACBP22694 351 aa17.52■□□□□ 0.39
SCARB2-213ENST00000638680 LDAHQ9H6V9 325 aa17.52■□□□□ 0.39
SCARB2-213ENST00000638680 NALCNQ8IZF0 1738 aa17.52■□□□□ 0.39
SCARB2-213ENST00000638680 SLC5A2P31639 672 aa17.52■□□□□ 0.39
SCARB2-213ENST00000638680 SNU13P55769 128 aaKnown RBP17.52■□□□□ 0.39
SCARB2-213ENST00000638680 MFSD13AQ14CX5 517 aa17.52■□□□□ 0.39
SCARB2-213ENST00000638680 FAM205BPQ63HN1 556 aa17.52■□□□□ 0.39
SCARB2-213ENST00000638680 OR5H2Q8NGV7 314 aa17.52■□□□□ 0.39
SCARB2-213ENST00000638680 GAB3Q8WWW8 586 aa17.52■□□□□ 0.39
SCARB2-213ENST00000638680 KLHDC7BQ96G42 594 aa17.52■□□□□ 0.39
SCARB2-213ENST00000638680 C11orf49Q9H6J7 331 aa17.52■□□□□ 0.39
SCARB2-213ENST00000638680 WDR6Q9NNW5 1121 aaKnown RBP17.52■□□□□ 0.39
SCARB2-213ENST00000638680 B3GNT3Q9Y2A9 372 aa17.52■□□□□ 0.39
SCARB2-213ENST00000638680 LOC102723532A0A0G2JNH3 316 aa17.51■□□□□ 0.39
SCARB2-213ENST00000638680 ARPC1BO15143 372 aaKnown RBP17.51■□□□□ 0.39
SCARB2-213ENST00000638680 OR8U9P0C7N5 309 aa17.51■□□□□ 0.39
SCARB2-213ENST00000638680 UGT2B7P16662 529 aa17.51■□□□□ 0.39
SCARB2-213ENST00000638680 PRMT2P55345 433 aa17.51■□□□□ 0.39
SCARB2-213ENST00000638680 DHCR24Q15392 516 aa17.51■□□□□ 0.39
SCARB2-213ENST00000638680 TRIM46Q7Z4K8 759 aa17.51■□□□□ 0.39
SCARB2-213ENST00000638680 WDR53Q7Z5U6 358 aaPredicted RBP17.51■□□□□ 0.39
SCARB2-213ENST00000638680 CYB561A3Q8NBI2 242 aa17.51■□□□□ 0.39
SCARB2-213ENST00000638680 PPP4R1LQ9P1A2 415 aa17.51■□□□□ 0.39
SCARB2-213ENST00000638680 UBE2J1Q9Y385 318 aaPredicted RBP17.51■□□□□ 0.39
SCARB2-213ENST00000638680 IGKV6-21A0A0C4DH24 114 aa17.51■□□□□ 0.39
SCARB2-213ENST00000638680 RHOP08100 348 aa17.51■□□□□ 0.39
SCARB2-213ENST00000638680 ARL3P36405 182 aa17.51■□□□□ 0.39
SCARB2-213ENST00000638680 SOX9P48436 509 aa17.51■□□□□ 0.39
SCARB2-213ENST00000638680 GPR157Q5UAW9 335 aa17.51■□□□□ 0.39
SCARB2-213ENST00000638680 DCUN1D4Q92564 292 aa17.51■□□□□ 0.39
SCARB2-213ENST00000638680 PHRF1Q9P1Y6 1649 aaKnown RBP17.51■□□□□ 0.39
SCARB2-213ENST00000638680 LOC105369274A0A096LPK9 316 aa17.51■□□□□ 0.39
SCARB2-213ENST00000638680 SLC2A5P22732 501 aa17.51■□□□□ 0.39
SCARB2-213ENST00000638680 CD70P32970 193 aa17.51■□□□□ 0.39
SCARB2-213ENST00000638680 MAGEA6P43360 314 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms