RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 NR4A3Q92570 626 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 TSSK6Q9BXA6 273 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 EGLN3Q9H6Z9 239 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 WDR45Q9Y484 360 aa20.11■□□□□ 0.81
CLN6-224ENST00000638076 DBTP11182 482 aaKnown RBP20.1■□□□□ 0.81
CLN6-224ENST00000638076 GLULP15104 373 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 PCYT1AP49585 367 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 RGS8P57771 180 aaPredicted RBP20.1■□□□□ 0.81
CLN6-224ENST00000638076 CDK5Q00535 292 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 ZNF91Q05481 1191 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 ST3GAL3Q11203 375 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 DOC2BQ14184 412 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 COL19A1Q14993 1142 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 OCLNQ16625 522 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 ARHGAP11BQ3KRB8 267 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 SOWAHCQ53LP3 525 aaPredicted RBP20.1■□□□□ 0.81
CLN6-224ENST00000638076 MEDAGQ5VYS4 303 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 PRICKLE2Q7Z3G6 844 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 ZNF438Q7Z4V0 828 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 KIF18BQ86Y91 864 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 GJD3Q8N144 294 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 POLDIP3Q9BY77 421 aaKnown RBP20.1■□□□□ 0.81
CLN6-224ENST00000638076 PLA2G12AQ9BZM1 189 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 RNF167Q9H6Y7 350 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 MTHFD2LQ9H903 347 aaPredicted RBP20.1■□□□□ 0.81
CLN6-224ENST00000638076 STARD5Q9NSY2 213 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 ZNF443Q9Y2A4 671 aaPredicted RBP20.1■□□□□ 0.81
CLN6-224ENST00000638076 NTNG1Q9Y2I2 539 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 PCDHGA3Q9Y5H0 932 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 FAM170BA6NMN3 283 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 FGF17O60258 216 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 IGLV3-19P01714 112 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 ACP2P11117 423 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 PUS10Q3MIT2 529 aaKnown RBP20.1■□□□□ 0.81
CLN6-224ENST00000638076 ZNF730Q6ZMV8 503 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 TDHQ8IZJ6 230 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 CSNK1A1LQ8N752 337 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 TMEM80Q96HE8 168 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 ADAP2Q9NPF8 381 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 C19orf53Q9UNZ5 99 aaPredicted RBP20.1■□□□□ 0.81
CLN6-224ENST00000638076 SPACA6W5XKT8 324 aa20.1■□□□□ 0.81
CLN6-224ENST00000638076 AP3D1O14617 1153 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 BMP4P12644 408 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 IFNA8P32881 189 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 CSTF2P33240 577 aaKnown RBP eCLIP20.09■□□□□ 0.81
CLN6-224ENST00000638076 VSX2P58304 361 aaPredicted RBP20.09■□□□□ 0.81
CLN6-224ENST00000638076 SHC2P98077 582 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 HHEXQ03014 270 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 TSTQ16762 297 aaKnown RBP20.09■□□□□ 0.81
CLN6-224ENST00000638076 CCNJQ5T5M9 372 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 DCDC5Q6ZRR9 648 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 MFSD4AQ8N468 514 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 FAM26EQ8N5C1 309 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 MCFD2Q8NI22 146 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 GNPDA2Q8TDQ7 276 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 GAS2L1Q99501 681 aaPredicted RBP20.09■□□□□ 0.81
CLN6-224ENST00000638076 CHCHD6Q9BRQ6 235 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 FAIMQ9NVQ4 179 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 CNIH4Q9P003 139 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 SLCO1B1Q9Y6L6 691 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 CKMT1AP12532 417 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 TYRP1P17643 537 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 IFNGR2P38484 337 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 SMSP52788 366 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 MLLT1Q03111 559 aaPredicted RBP20.09■□□□□ 0.81
CLN6-224ENST00000638076 ATP1A4Q13733 1029 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 NCF4Q15080 339 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 INAQ16352 499 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 FHL5Q5TD97 284 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 PLEKHM3Q6ZWE6 761 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 RRM2BQ7LG56 351 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 PEX5LQ8IYB4 626 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 MCHR1Q99705 422 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 CENPOQ9BU64 300 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 IL21RQ9HBE5 538 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 WSB2Q9NYS7 404 aaPredicted RBP20.09■□□□□ 0.81
CLN6-224ENST00000638076 CLEC2DQ9UHP7 191 aa20.09■□□□□ 0.81
CLN6-224ENST00000638076 OR5K3A6NET4 321 aa20.08■□□□□ 0.81
CLN6-224ENST00000638076 CYR61O00622 381 aa20.08■□□□□ 0.81
CLN6-224ENST00000638076 HCRTR1O43613 425 aa20.08■□□□□ 0.81
CLN6-224ENST00000638076 GALR3O60755 368 aaPredicted RBP20.08■□□□□ 0.81
CLN6-224ENST00000638076 SULT1C4O75897 302 aa20.08■□□□□ 0.81
CLN6-224ENST00000638076 ATP1B1P05026 303 aa20.08■□□□□ 0.81
CLN6-224ENST00000638076 RGS21Q2M5E4 152 aa20.08■□□□□ 0.81
CLN6-224ENST00000638076 MANEAQ5SRI9 462 aa20.08■□□□□ 0.81
CLN6-224ENST00000638076 OOSP2Q86WS3 158 aa20.08■□□□□ 0.81
CLN6-224ENST00000638076 SLC34A3Q8N130 599 aa20.08■□□□□ 0.81
CLN6-224ENST00000638076 CENPSQ8N2Z9 138 aa20.08■□□□□ 0.81
CLN6-224ENST00000638076 FAM46AQ96IP4 442 aaKnown RBP20.08■□□□□ 0.81
CLN6-224ENST00000638076 LRR1Q96L50 414 aa20.08■□□□□ 0.81
CLN6-224ENST00000638076 SDF2Q99470 211 aa20.08■□□□□ 0.81
CLN6-224ENST00000638076 CCDC3Q9BQI4 270 aa20.08■□□□□ 0.81
CLN6-224ENST00000638076 DSN1Q9H410 356 aa20.08■□□□□ 0.81
CLN6-224ENST00000638076 CACYBPQ9HB71 228 aaKnown RBP20.08■□□□□ 0.81
CLN6-224ENST00000638076 C2orf42Q9NWW7 574 aa20.08■□□□□ 0.81
CLN6-224ENST00000638076 ZNF232Q9UNY5 417 aa20.08■□□□□ 0.81
CLN6-224ENST00000638076 SCN2AQ99250 2005 aa20.08■□□□□ 0.81
CLN6-224ENST00000638076 CCRL2O00421 344 aa20.08■□□□□ 0.8
CLN6-224ENST00000638076 NT5EP21589 574 aa20.08■□□□□ 0.8
CLN6-224ENST00000638076 LIMK1P53667 647 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms