RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 ITGB1BP2Q9UKP3 347 aa17.27■□□□□ 0.36
CLN6-221ENST00000637494 TMED5Q9Y3A6 229 aa17.27■□□□□ 0.36
CLN6-221ENST00000637494 MYO9AB2RTY4 2548 aa17.27■□□□□ 0.36
CLN6-221ENST00000637494 HCFC1P51610 2035 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 PKDREJQ9NTG1 2253 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 CD8B2A6NJW9 211 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 TTC36A6NLP5 189 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 NPIPB8E9PQR5 432 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 H0Y3Z8 333 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 PDPK1O15530 556 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 NPHS1O60500 1241 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 ZWINTO95229 277 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 IFI6P09912 130 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 UQCRC1P31930 480 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 CEACAM8P31997 349 aaPredicted RBP17.26■□□□□ 0.35
CLN6-221ENST00000637494 ASCL1P50553 236 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 ARSKQ6UWY0 536 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 RNF165Q6ZSG1 346 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 TRABD2AQ86V40 505 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 TMEM200AQ86VY9 491 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 DDIASQ8IXT1 998 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 BANPQ8N9N5 519 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 ZPLD1Q8TCW7 415 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 PPCDCQ96CD2 204 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 ELP4Q96EB1 424 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 FAM111AQ96PZ2 611 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 TNFRSF12AQ9NP84 129 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 PPP4R1LQ9P1A2 415 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 FOXD3Q9UJU5 478 aaPredicted RBP17.26■□□□□ 0.35
CLN6-221ENST00000637494 CBLCQ9ULV8 474 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 CCL27Q9Y4X3 112 aa17.26■□□□□ 0.35
CLN6-221ENST00000637494 UPK1AO00322 258 aa17.25■□□□□ 0.35
CLN6-221ENST00000637494 NME6O75414 186 aaPredicted RBP17.25■□□□□ 0.35
CLN6-221ENST00000637494 LINC00032P0C843 101 aa17.25■□□□□ 0.35
CLN6-221ENST00000637494 CPN1P15169 458 aa17.25■□□□□ 0.35
CLN6-221ENST00000637494 GRK2P25098 689 aa17.25■□□□□ 0.35
CLN6-221ENST00000637494 ALDH3A1P30838 453 aa17.25■□□□□ 0.35
CLN6-221ENST00000637494 ASMTP46597 345 aa17.25■□□□□ 0.35
CLN6-221ENST00000637494 VSNL1P62760 191 aa17.25■□□□□ 0.35
CLN6-221ENST00000637494 RPL38P63173 70 aaKnown RBP17.25■□□□□ 0.35
CLN6-221ENST00000637494 PSG6Q00889 435 aa17.25■□□□□ 0.35
CLN6-221ENST00000637494 VPS26BQ4G0F5 336 aa17.25■□□□□ 0.35
CLN6-221ENST00000637494 EMBQ6PCB8 327 aa17.25■□□□□ 0.35
CLN6-221ENST00000637494 SEM1Q6ZVN7 128 aa17.25■□□□□ 0.35
CLN6-221ENST00000637494 CDH24Q86UP0 819 aa17.25■□□□□ 0.35
CLN6-221ENST00000637494 TRIM42Q8IWZ5 723 aa17.25■□□□□ 0.35
CLN6-221ENST00000637494 OR2L13Q8N349 312 aa17.25■□□□□ 0.35
CLN6-221ENST00000637494 GFM2Q969S9 779 aaKnown RBP17.25■□□□□ 0.35
CLN6-221ENST00000637494 ZBED6CLQ96FA7 236 aaPredicted RBP17.25■□□□□ 0.35
CLN6-221ENST00000637494 ABCG2Q9UNQ0 655 aa17.25■□□□□ 0.35
CLN6-221ENST00000637494 MRPS18CQ9Y3D5 142 aaKnown RBP17.25■□□□□ 0.35
CLN6-221ENST00000637494 ARHGAP21Q5T5U3 1957 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 SCO2O43819 266 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 KCNH1O95259 989 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 DPP4P27487 766 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 MAPK1P28482 360 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 EVI2BP34910 448 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 OPRM1P35372 400 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 MANFP55145 182 aaKnown RBP17.24■□□□□ 0.35
CLN6-221ENST00000637494 SRYQ05066 204 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 HSPB3Q12988 150 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 KIAA0040Q15053 153 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 GALNTL6Q49A17 601 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 DCST1Q5T197 706 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 KANK2Q63ZY3 851 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 CHMP1BQ7LBR1 199 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 R3HCC1LQ7Z5L2 792 aaKnown RBP17.24■□□□□ 0.35
CLN6-221ENST00000637494 OR4N2Q8NGD1 307 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 CEP70Q8NHQ1 597 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 ZNF764Q96H86 408 aaPredicted RBP17.24■□□□□ 0.35
CLN6-221ENST00000637494 EGLN2Q96KS0 407 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 SFXN2Q96NB2 322 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 TSSK3Q96PN8 268 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 TM9SF2Q99805 663 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 REEP4Q9H6H4 257 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 PTGES2Q9H7Z7 377 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 HHATLQ9HCP6 504 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 SH3BP4Q9P0V3 963 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 LGALS13Q9UHV8 139 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 TRAF6Q9Y4K3 522 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 DNAJC15Q9Y5T4 150 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 PTGDR2Q9Y5Y4 395 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 APCP25054 2843 aa17.24■□□□□ 0.35
CLN6-221ENST00000637494 MBD3L4A6NDZ8 208 aaPredicted RBP17.23■□□□□ 0.35
CLN6-221ENST00000637494 MBD3L3A6NE82 208 aaPredicted RBP17.23■□□□□ 0.35
CLN6-221ENST00000637494 MBD3L5A6NJ08 208 aaPredicted RBP17.23■□□□□ 0.35
CLN6-221ENST00000637494 TMEM114B3SHH9 223 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 SYT5O00445 386 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 AKAP10O43572 662 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 SPAG7O75391 227 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 FGF4P08620 206 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 PRPS2P11908 318 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 TACR1P25103 407 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 CTSSP25774 331 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 SERPINB5P36952 375 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 KIR2DL3P43628 341 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 RFX3P48380 749 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 DGKQP52824 942 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 DSCR4P56555 118 aaPredicted RBP17.23■□□□□ 0.35
CLN6-221ENST00000637494 WNT3P56703 355 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms